Stackebrandtia nassauensis: Snas_5507
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Entry
Snas_5507 CDS
T01194
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sna
Stackebrandtia nassauensis
Pathway
sna02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Snas_5507
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sna02000
]
Snas_5507
Transporters [BR:
sna02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Snas_5507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF7625
Motif
Other DBs
NCBI-ProteinID:
ADD45138
UniProt:
D3PW17
LinkDB
All DBs
Position
complement(5847233..5848981)
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AA seq
582 aa
AA seq
DB search
MRKSLATVGVLALMVSTVAACSSNEGGKDEGTKDFEVKPAVISKDAKDSEGPASEVKGAQ
TGGEATYLAPTTFDHLDPRQTYYVNTLEIGRLFSRQLTSYRVMGEETKVVGDLATGPGKD
LGDCKAWEYELKDGLKYEDGSPIKADDIAYAISSTFDSRLQDGPSSYFRGWLKGAEKYKG
PFKDKGSRAPGIKVDGDNKITFELSSPHCDLPYMAAMSVTSPLPEKKEAKNPADYDFKPF
SSGPYKFEGKWSENKGVTLVKNENWDPKTDPIRHQYVDTFKVNFGDNHKATTDALRADKG
ADATSMTDTVDINQVPEIVKDKELMKRVENVPGIFVYWMGINNMKIKDPDVRKALAYAVD
KEAIVKATGGSSQATPASTTLSPTVAGYEDQMDMYKGPKGDKKKAKELLKGKDVKSLTYA
YRASPANKKIASSLQDQLKEVGIELKIKELSETEAPSILSDPQENKYDLYMKNWGADWPT
GYSVLQPIYDGRTITDDPGNVNNIWFDEKEVNDQIDKVMNMTDPEEQNKAYMDLDKKILE
EYMPMVPLYYSKTFAMHGSKVGGLYSTNTTGTTSFTDVFVKS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagtcactggcgacagtcggtgtactcgccttgatggtgagcaccgtcgccgcc
tgtagctcgaatgaaggcgggaaggacgaaggcaccaaggacttcgaggtcaagcccgct
gtcatcagcaaggatgccaaggattccgagggtccggccagcgaggtcaagggtgcccag
acaggcggggaggccacctatctggcccccacgaccttcgaccaccttgaccctcgtcag
acctactacgtcaacacccttgagatcggccgcctgttctcccgtcagctgaccagctac
cgggtgatgggcgaggagaccaaggtcgtcggcgacctcgccaccggtcccggtaaggac
ctcggcgactgcaaggcctgggaatacgagctcaaggacggcctgaagtacgaggacggt
tcgccgatcaaggccgacgacatcgcctacgcgatctcctcgaccttcgacagccgactg
caggacggtccctcgtcctacttccgtggctggctgaagggtgccgagaagtacaagggc
ccgttcaaggacaagggttcccgcgctccgggcatcaaggtcgacggtgacaacaagatc
accttcgagctgagctccccgcactgcgacctgccgtacatggcggccatgagcgtcact
tctccgctgccggagaagaaggaggccaagaacccggccgactacgacttcaagccgttc
tcctcgggcccgtacaagttcgagggcaagtggagcgagaacaagggcgtcaccctcgtc
aagaacgagaactgggaccccaagaccgacccgatccgtcaccagtacgtcgacaccttc
aaggtgaacttcggtgacaaccacaaggccaccactgacgcgctgcgtgccgacaagggc
gcggacgccacgtcgatgaccgacacggtcgacatcaaccaggtccctgagatcgtcaag
gacaaggaactgatgaagcgggtcgagaacgtcccgggcatcttcgtgtactggatgggc
atcaacaacatgaagatcaaggaccccgacgtccgcaaggcgctggcgtacgcggtcgac
aaggaggccatcgtcaaggccacgggtggatcgagccaggccacgcccgcctcgacgacc
ctgagcccgaccgtcgccggttacgaagaccagatggacatgtacaagggtccgaagggc
gacaagaagaaggccaaggagctgctcaagggcaaggacgtcaagtcgctgacgtacgcc
taccgtgccagccccgccaacaagaagatcgcctcctcgctgcaggaccagctcaaagag
gtcggcatcgagctgaagatcaaggagctgagcgagaccgaggctccgtcgatcctgagc
gacccgcaggagaacaagtacgacctgtacatgaagaactggggtgctgactggcccacc
ggttacagcgtgctgcagccgatctacgacggccgcaccatcactgacgacccgggcaac
gtcaacaacatctggttcgacgaaaaagaggtcaacgaccagatcgacaaggtcatgaac
atgaccgaccccgaggagcagaacaaggcctacatggatctcgacaagaagatcctggag
gagtacatgccgatggtcccgctgtactacagcaagaccttcgcgatgcacggttccaag
gtgggcggtctctactcgaccaacaccactggtaccacctcgttcaccgacgtcttcgtc
aagtcgtaa
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