Stackebrandtia nassauensis: Snas_5634
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Entry
Snas_5634 CDS
T01194
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sna
Stackebrandtia nassauensis
Pathway
sna03030
DNA replication
sna03430
Mismatch repair
sna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Snas_5634
03430 Mismatch repair
Snas_5634
03440 Homologous recombination
Snas_5634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sna03032
]
Snas_5634
03400 DNA repair and recombination proteins [BR:
sna03400
]
Snas_5634
Enzymes [BR:
sna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Snas_5634
DNA replication proteins [BR:
sna03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Snas_5634
DNA repair and recombination proteins [BR:
sna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Snas_5634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADD45264
UniProt:
D3PX40
LinkDB
All DBs
Position
complement(5989406..5990086)
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AA seq
226 aa
AA seq
DB search
MDDSTWHTGPLLGFDTETTGIDTTTARIVTAAIVNGDDVASWLINPGIDIPAAASNVHGI
STEHARANGTEPALALSEIGRALTKAAEEDTPVVVYRAGYDLTLLSHELDRYSLPQVPWE
RLKVLDPFVLDKKADKFRRGKRTLSAVCTHYDVDLSGAHSADADARAAVSLARAIGQRHK
ALAAMNITELHTAQIAWHADDAASLEAYFRRQGKQETIDRRWPLQR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcgacgtggcataccggcccactactgggattcgacaccgagaccaccggc
atcgacacgacgacggcccgcatcgtcacagccgccatagtgaacggtgacgacgtggcc
agctggctcatcaaccccggcatcgacataccggcggcggccagcaacgtccacggcatc
tccaccgaacacgcccgcgccaacggcaccgaacccgcgctggcactgtccgaaatcggc
agagcgctcaccaaggcggccgaagaggacacccccgtcgtggtctaccgcgccggttac
gacctcaccctcctgtcgcacgaactggaccggtactcgctaccccaggtcccgtgggag
cgcctgaaagtcctcgacccgttcgtcctggacaagaaggccgacaagttccggcgcggc
aagcgaaccctgtcggcggtgtgcacccactacgacgtcgacctctcgggcgcccacagt
gccgacgccgacgcccgcgccgcggtctcactggcccgcgcgatcggccaacgccacaaa
gcgctggcggccatgaacatcaccgaactccacacggcccagatcgcttggcacgccgac
gatgcggccagcctggaggcgtacttccggcgacagggcaaacaggagactatcgaccgg
cgctggccgttgcagcgctga
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