Stackebrandtia nassauensis: Snas_5848
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Entry
Snas_5848 CDS
T01194
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sna
Stackebrandtia nassauensis
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sna03016
]
Snas_5848
Enzymes [BR:
sna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Snas_5848
Transfer RNA biogenesis [BR:
sna03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Snas_5848
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
ADD45477
UniProt:
D3PZ48
LinkDB
All DBs
Position
complement(6213436..6213966)
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AA seq
176 aa
AA seq
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MGLRPSDAALADLAGYLPRIGLDGARPTGRQTWHLTLAFIGELDDRRVEDVSAALTALSR
TTAGFALRLAGGTVLGRTSTALCVGTDGDTTALTALAERVRTGLRRSGVPFDERPFKPHL
TVARPKDLSPAEVQAKVDALGGYNGPSWRAEKLVLYRSHPGPPVRYEALERFPLRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgggcctgcggcccagcgacgcggcgctcgccgacctggcgggctacctgccccggatc
gggctagacggtgcccggcccaccggacgacagacctggcacctgacgctggccttcatc
ggggaactcgacgaccgccgggtcgaggacgtctccgccgcgctgacggcgctgagccgc
accaccgccgggttcgcgctgcggctggccggtggcacggtgctgggccgcacctcgacg
gcgttgtgcgtcggcaccgacggtgacaccacggcgctgaccgcgctggccgagcgggta
cgcaccgggctgcgtcgctccggggtgcccttcgacgagcggccgttcaaaccgcacctg
acggtggcccggcccaaggacctgtccccggccgaagtgcaggccaaagtggacgcgctc
ggtggctacaacggcccgtcctggcgcgctgagaaactcgtcctgtaccgcagccacccg
ggcccgccggtccgctacgaggcgctggaacggttcccgttgcgcggctaa
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