Stackebrandtia nassauensis: Snas_6413
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Entry
Snas_6413 CDS
T01194
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sna
Stackebrandtia nassauensis
Pathway
sna03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Snas_6413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sna03400
]
Snas_6413
Enzymes [BR:
sna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Snas_6413
DNA repair and recombination proteins [BR:
sna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Snas_6413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADD46029
UniProt:
D3Q5G9
LinkDB
All DBs
Position
complement(6767702..6768478)
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AA seq
258 aa
AA seq
DB search
MRIGSHVDASSPLDEAAKRGAEVVQFFIGDPQGWKKPESRPDAEALRASDVDIFVHAPYV
INVASPNNRIRIPSRKLLLQQARVAAEIGAKGLIVHGGHVTKDEDMAVGFANWRKAFEFG
ADQGGFGLPILIENTAGGDKACARRLENIERLWEAVGDFDPGFCLDTCHAHAGGLDLSDV
VDRAKAITGHIDLIHANDSRDTFDSGRDRHANLGAGHIDPQRIVDIISAARCPAVVETPG
DAEAQSADIALIREHLKT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcggatcccacgttgacgccagcagcccactggacgaggccgccaagcgcggc
gccgaggtggtgcagttcttcatcggcgatccgcagggctggaagaaaccggagtcccgg
cccgacgccgaggcgctgcgggccagcgacgtcgacatcttcgtgcacgcgccctacgtc
atcaacgtcgcctcgccgaacaaccggatccggatcccgagccgcaagctgctgctgcaa
caggcgcgggtggccgccgagatcggcgccaaggggctgatcgtccacggcgggcacgtg
accaaggacgaggacatggccgtcggcttcgccaactggcgcaaggccttcgagttcggg
gccgaccagggtggcttcgggctgccgatcctcatcgagaacaccgcgggcggcgacaag
gcctgcgcccgccgcctggagaacatcgagcggctgtgggaggcggtgggcgacttcgat
cccggcttctgcctcgacacctgtcacgcccacgcgggcggcctggacctgtccgatgtg
gtcgaccgtgccaaggccatcacgggacacatcgacctgatccacgccaacgattcccgc
gacaccttcgactccggccgcgaccgtcacgccaacctcggcgccgggcacatcgaccct
cagcgaattgtcgatatcatctcggctgcgaggtgtccggcggtcgtggaaacacccggc
gacgccgaggcgcagtcggcagatatcgcactgatccgggagcacctgaagacatga
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