Streptomonospora nanhaiensis: OUQ99_03270
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Entry
OUQ99_03270 CDS
T08686
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
snah
Streptomonospora nanhaiensis
Pathway
snah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OUQ99_03270
09124 Replication and repair
03420 Nucleotide excision repair
OUQ99_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snah03021
]
OUQ99_03270
03400 DNA repair and recombination proteins [BR:
snah03400
]
OUQ99_03270
Enzymes [BR:
snah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OUQ99_03270
Transcription machinery [BR:
snah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OUQ99_03270
DNA repair and recombination proteins [BR:
snah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OUQ99_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
WAE74162
LinkDB
All DBs
Position
complement(707116..708762)
Genome browser
AA seq
548 aa
AA seq
DB search
MSCLIVQSDKTLLLEVDHELAGECRRAIAPFAELERAPEHVHTYRITPLALWNSRAAGHD
AEQVVDALIRFSRFPVPHSLLVDIAETMQRYGRLRIVGDPVRGLVLESSDRAVLEEVVRA
KKLKGMLGERLGEDSVAVHPSERGNLKQALLKIGWPAEDLAGYVDGEAHAIDLDQDGWEL
RGYQKEAAESFHAGGSGVVVLPCGAGKTIVGAAAMALTGATTLILVTNTVSVHQWKTELL
RRTSLTEDEIGEYSGTRKEIRPVTIATYQVMAARRKGVYTHLELFDARDWGLVVYDEVHL
LPAPIFRMTASLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDMENQGWIAPAD
CVEVRVDLSESERLAYATAEPEDRYRFCASSETKTSVVRQIVERHPEEQVLVIGSYIDQL
DELGASLDAPVIKGETRNKERERLFDAFRSGELRTLVVSKVANFSIDLPEAGVAVQVSGS
FGSRQEEAQRLGRVLRPKTDGRAARFYAVVARDTLDQDYAAHRQRFLAEQGYAYRITDAS
DLLSGEEI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctgcctgatcgtccagtccgacaagacgctcctgctcgaggtcgaccacgagctc
gccggcgagtgccgccgagccatcgcgcccttcgccgaactggagcgcgcacccgagcac
gtgcacacctaccggatcactccgctggcgctgtggaactcgcgcgccgccggacacgac
gccgagcaggtcgtggacgcgctgatccgcttctccaggttcccggtgccgcactccctg
ctggtggacatcgccgagaccatgcagcgctacgggcgcctgcgcatcgtcggtgacccc
gtgcgcgggctggtcctggagtcctcggacagggccgtcctggaggaggtcgtccgggcc
aagaagctcaagggcatgctcggcgagcggctgggcgaggactcggtggccgtgcacccc
agcgagcgcggcaacctcaagcaggcgctgctgaagatcggctggcccgccgaggacctg
gccgggtacgtggacggcgaggcccacgccatcgacctggaccaggacggctgggagctg
cgcggctaccagaaggaggccgcggagagcttccacgcgggcggctccggcgtcgtcgtg
ctgccgtgcggcgcgggcaagaccatcgtgggcgcggcggcgatggcgctcaccggggcg
accaccctcatcctcgtgacgaacaccgtgtcggtccaccagtggaagacggagctgctg
cggcgcacctccctcaccgaggacgagatcggcgagtactcggggacgcgcaaggagatc
cggccggtcacgatcgcgacctaccaggtgatggccgccaggcgcaagggcgtgtacacg
cacctggagctgttcgacgcccgcgactgggggctcgtggtctacgacgaggtccacctg
ctgccggcgccgatcttccggatgacggcgagcctccaggcccggcgccgcctggggctc
accgcgacgctggtgcgggaggacggccgggagggcgacgtgttctcgctcatcggcccc
aagcgctacgacgccccgtggaaggacatggagaaccaggggtggatcgcccccgcggac
tgcgtggaggtccgggtggacctgtcggagtccgagcgcctggcctacgcgaccgccgag
cccgaggaccgctaccggttctgcgcctcctccgagacgaagacctcggtggtgcggcag
atcgtggagcgccaccccgaggagcaggtgctggtcatcggctcctacatcgaccagctg
gacgagctgggcgcctccctggacgcccccgtgatcaagggcgagaccaggaacaaggag
cgcgagaggctgttcgacgccttccgctccggcgagctgcgcacgctggtggtctccaag
gtcgcgaacttctccatcgacctgcccgaggcgggcgtggcggtgcaggtgtccggctcc
ttcgggtcccgccaggaggaggcccagcgcctgggccgggtcctgcggcccaagaccgac
ggccgcgccgcgcgcttctacgcggtggtcgccagggacaccctcgaccaggactacgcc
gcgcaccggcagcgcttcctcgccgagcaggggtacgcgtaccggatcaccgacgcgtcg
gacctgctgtccggcgaggagatctag
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