Streptomonospora nanhaiensis: OUQ99_06945
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Entry
OUQ99_06945 CDS
T08686
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
snah
Streptomonospora nanhaiensis
Pathway
snah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OUQ99_06945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snah03019
]
OUQ99_06945
03009 Ribosome biogenesis [BR:
snah03009
]
OUQ99_06945
Enzymes [BR:
snah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
OUQ99_06945
Messenger RNA biogenesis [BR:
snah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OUQ99_06945
Ribosome biogenesis [BR:
snah03009
]
Prokaryotic type
rRNA processing factors
OUQ99_06945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
WAE74833
LinkDB
All DBs
Position
1570399..1573449
Genome browser
AA seq
1016 aa
AA seq
DB search
MLDNEPNDGAESTAGTTEASARKAAPPGGGGEVRVTTPAPVRGVRRAAGPPPEPDDVFTP
PSMPVTSLAGSGEGGTVKTAVSTTARRRTVRAAGRPDEDPAPRRSRTRATADTEPATART
AAEDSAERGDKAADTPDTAGSARTRGRSRARTRASEAAETPEAIPAQEDEETAEQGGGSV
FQAPAMLFQPPVASASPAPVADPSAEEDDEDEDDEEAEDTADRSSDAEETGDPSDDRPSR
RRRRRGGRGRGRSRSGDEAEGEAPEPAAEKPERRRSRAAEVEAADTAEDDNDVDAESDED
TGEDGERGSSRRRRRRRRRSGGGSGGETTADDPPNTVVRVREPRAEKPIEDEVQSVRGST
RLEAKKQRRREGREQGRRRAPIVTESEFLARREAVKRDLVVRRTGDRTQIAVLEDDILVE
HYVDRATHRSYVGNVYLGRVQNVLPSMEAAFVDIGKGRNAVLYAGEVNWDSFGLDGQPKR
IESVLKSGQSVLVQVTKDPVGHKGARLTSQISLPGRYLVYVPGGSMTGISRKLPDKERAR
LKQILKKVMPSGAGVIVRTAAEGASEEELERDITRLAKQWDSIKRKSKSANAPSLLNSEP
DLTVRVVRDVFNEDFSSLVVSGEEAWTTVHEYVDYVAPNLAERLSHWSEDRDVFSAYRID
EQINKALERKVWLPSGGSLVIDRTEAMTVVDVNTGKFTGQGGNLEETVTKNNLEAAEEIV
RQLRLRDIGGIIVIDFIDMVLESNRDLVLRRMLECLSRDRTKHQVAEVTSLGLVQMTRKR
VGQGLLEAFSHTCEHCSGRGLVLSGDLLEKGAGAGGNGGGRKKKKGKGDTDQPAEKAEKA
EKPSDEGEGDDAAGQAEPEQEPERTADAPEAEADKPEQAEEQAEPAKKTRKRATRSRKAA
DAADAEQADTGTAAQAEDGADSAPAPAADAEPEKAPAKRTRTRRTGTKAARAAADKGEAA
VQDGGGADAAGDADTAVGETPAPAENGDEEAAERPKRRRTRRAKTAAAPPSAVDAG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaacgagcccaacgacggtgccgagagcaccgcgggtacaactgaagcaagc
gctcgcaaggcggcgccccccggcgggggaggtgaggtgcgtgtgaccacgccggcgccg
gtacgcggcgtccgccgcgcggccggaccgcccccggagccggacgacgtcttcaccccg
ccctcgatgcccgtcacctcgctcgccggttccggcgaggggggcacggtcaagacggcg
gtgtccaccaccgcccgcaggcgcaccgtgcgcgccgcgggccgtcccgacgaggacccg
gccccgcgccgcagccgcacccgcgccaccgcggacacggagcccgcgaccgcgcggacc
gcggccgaggactccgccgagcgcggcgacaaggccgccgacacccctgacaccgcgggg
tccgcccggacccgcggccggtcccgtgcgcgcacgcgcgcgtccgaggccgccgagacg
cccgaggcgatccccgcccaggaggacgaggagaccgccgagcagggtggcggcagcgtc
ttccaggcgcccgccatgctgttccagccgccggtggccagtgcctccccggcgcccgtc
gccgacccctccgcggaagaggacgacgaggacgaggacgacgaggaggccgaggacacg
gccgaccggtcctccgacgcagaggagaccggcgacccctccgacgaccgtccgagccgc
cgtcgccgccgccggggcggccgcggccgcggccggtcccgctccggtgacgaggccgag
ggcgaggcccccgagcccgccgcggagaagcccgagcggcgcaggagccgcgcggccgag
gtcgaggccgccgacaccgccgaggacgacaacgacgtcgacgccgagtccgacgaggac
acgggggaggacggcgaacgcggcagcagccgccgtcgccgccgccgtcggcgccggtcc
ggcgggggctcgggcggcgagaccaccgccgacgacccgcccaacaccgtggtccgggtg
cgcgagccgcgagccgagaagccgatcgaggacgaggtccagtccgtccgcggctccacg
cggctggaggccaagaagcagcgccgccgcgagggccgcgagcagggccgccgccgcgcc
ccgatcgtcaccgagtcggagttcctggcccgccgcgaggcggtcaagcgcgacctcgtc
gtccgccgtaccggcgaccgcacccagatcgccgtcctggaggacgacatcctggtcgag
cactacgtcgaccgggccacccaccgctcctacgtcggcaacgtctacctgggccgcgtc
cagaacgtgctgccgtccatggaggccgcgttcgtcgacatcggcaagggccgcaacgcc
gtcctgtacgcgggcgaggtcaactgggactcgttcggcctggacggccagcccaagcgc
atcgagtcggtgctcaagtccggccagtcggtcctggtacaggtcaccaaggacccggtc
ggccacaagggcgcccgcctgaccagccagatcagcctgcccggccgctacctcgtgtac
gtgcccggcggttccatgacgggcatcagccgcaagctccccgacaaggagcgcgcacgc
ctcaagcagatcctcaagaaggtcatgccgtccggcgccggggtgatcgtgcgcaccgcg
gccgagggggccagcgaggaggagctggagcgcgacatcacgcgcctggccaagcagtgg
gactcgatcaagcgcaagtccaagtcggccaacgcgccgtcgctgctcaacagcgagccg
gacctcaccgtccgggtcgtgcgcgacgtcttcaacgaggacttctccagcctggtcgtc
tccggcgaggaggcctggaccaccgtccacgagtacgtggactacgtggcgcccaacctc
gccgaacggctctcgcactggtccgaggaccgcgacgtcttctccgcctaccgcatcgac
gagcagatcaacaaggccctcgagcgcaaggtctggctgcccagcggcggttccctggtc
atcgaccggaccgaggccatgaccgtggtcgacgtcaacaccggcaagttcaccggccag
ggcggcaacctggaggagacggtcaccaagaacaacctggaggcggcggaggagatcgtc
cgccagctccggttgcgcgacatcggcggcatcatcgtcatcgacttcatcgacatggtg
ctggagtccaaccgggacctggtgctgcgccgcatgctggagtgcctgtcgcgcgaccgc
accaagcaccaggtggcggaggtcacctcgctgggcctggtgcagatgacccgcaagcgg
gtcggccagggccttctggaggcgttctcgcacacgtgcgagcactgcagcgggcgcggt
ctggtgctgtccggcgacctcctggagaagggcgccggcgcgggcggcaacggcggcggg
cgcaagaagaagaagggcaagggcgacaccgaccagcccgcggagaaggcggagaaggcg
gagaagccctccgacgagggcgagggcgacgacgcggccgggcaggccgagccggagcag
gagcccgagcggaccgccgacgcccccgaggccgaggccgacaagcccgagcaggccgag
gagcaggccgagcccgccaagaagacccgcaagcgcgccacccgctcccgcaaggccgcg
gacgcggcggacgccgagcaggcggacaccggcacggcggcccaggcggaggacggggcg
gactccgcgcccgcccccgccgcggacgccgagcccgagaaggccccggcgaagaggacc
cgcacccggcgcaccggaaccaaggccgcccgcgcggcggccgacaagggtgaggccgcg
gtgcaggacggcggtggggcggacgccgcaggcgacgccgacaccgccgtcggcgagacg
cccgccccggcggagaacggcgacgaggaggccgcggagcggcccaagcggcgccgcacc
cggcgggccaagacggcggcggccccgccgtccgccgtggacgcgggctga
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