Streptomonospora nanhaiensis: OUQ99_07390
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Entry
OUQ99_07390 CDS
T08686
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
snah
Streptomonospora nanhaiensis
Pathway
snah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OUQ99_07390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snah03019
]
OUQ99_07390
03400 DNA repair and recombination proteins [BR:
snah03400
]
OUQ99_07390
Enzymes [BR:
snah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OUQ99_07390
Messenger RNA biogenesis [BR:
snah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OUQ99_07390
DNA repair and recombination proteins [BR:
snah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OUQ99_07390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
MarR_2
MGS
Cas3-like_C_2
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
WAE74911
UniProt:
A0ABY6YRF8
LinkDB
All DBs
Position
1677275..1679440
Genome browser
AA seq
721 aa
AA seq
DB search
MATPTADTTVPADASGGALREQAEAHLRALAGDSARLREDQWTAIRALVAEHRRALVVQR
TGWGKSAVYFVATALRRAEGAGPTVIVSPLLALMRNQISAAERAGIRARTINSSNTTAWE
ATYADVAAGEVDVLLVSPERLNNPEFRDRVLPELAAGAGLVVIDEAHCVSDWGHDFRPDY
RRIRSLLHDLPDGVPVLATTATANERVTRDVAEQLQAGGERQDTLVLRGSLERESLRLAV
ARLPDPTARLSWLAEHLPKIHGSGIVYTLTVSAAQETARFLREQGLEVRAYTGQTDPDER
REAEDDLLANRVKALVATSALGMGFDKPDLGFVVHLGAPQSPISYYQQVGRAGRGVERAE
VVLLPGREDTQIWEYFAGLSFPPEQTVRQTLDVLAAEGRPLSVAALETRVDLRRTRLEQM
LKVLDVDGAVRRVRGGWEATGRPWSYDAERYAAVTEAREREQRAMLDYIDLDTCRMEFLR
RQLDDPESVACGRCDVCTGEYWNTDVDPGRREAAAEHLDRPGTPIAPRRQWPSGMDTLGV
GLTGKIKDDLRAGEGRALGRLTDIGWGNELRRVLADDAPDAPVDERMLQGVVRVLATWGW
ERRPVGVVVMPSRTRPALINDLASRLSRLGRLTPIGALEYGGAVEQRKHNSAMRLAQVYA
SLRVGDELRERLAAVQAETPGPVLLVDDYTDTGWSLTVGAALLRSAGAPEVLPLTLATTG
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggccacacccaccgctgacaccaccgtccccgccgacgcctccggcggcgcgctccgc
gagcaggccgaggcgcacctccgggcactggccggggactccgcacggctgcgcgaggac
cagtggaccgccatccgcgccctggtcgccgaacaccgcagggcactcgtcgtccagcgc
accggctggggcaagtcggcggtgtacttcgtcgccaccgccctgcgccgggcggagggt
gcgggcccgaccgtcatcgtctcgccgctcctggccctgatgcgcaaccagatctcggcc
gcggaacgggccggcatccgggcccggaccatcaacagctccaacaccaccgcgtgggag
gcgacctacgccgacgtcgccgcgggcgaggtcgacgtcctgctggtcagccccgagcgg
ctcaacaacccggagttccgcgaccgggtcctgccggagctcgccgcgggcgcgggcctg
gtcgtcatcgacgaggcccactgcgtctccgactggggccacgacttccgccccgactac
cggcgcatccggtccctgctgcacgacctgccggacggggtgcccgtcctggccaccacg
gccacggcgaacgagcgggtcacccgcgacgtcgccgagcagctccaggcgggcggcgag
cgccaggacaccctggtgctgcgcggctcgctggagagggagagcctgcggctggccgtg
gcgcggctgcccgaccccacggccaggctcagctggctcgcggagcacctccccaagatc
cacggatcggggatcgtgtacacgctgaccgtcagcgccgcccaggagaccgcccgcttc
ctccgcgagcaggggctggaggtgcgcgcctacaccgggcagaccgaccccgacgagcgc
cgggaggccgaggacgacctcctcgccaaccgggtcaaggcgctggtggccaccagcgcg
ctcggcatgggcttcgacaagcccgacctggggttcgtcgtgcacctcggtgcgccgcag
tccccgatctcctactaccagcaggtcggccgcgccggacgcggcgtggagcgcgccgag
gtggtcctgctgcccggccgcgaggacacccagatctgggagtacttcgcggggctgtcg
ttcccgccggagcagaccgtgcgccagaccctggacgtgctcgcggcggagggccggccc
ctgtccgtggccgcgctggagacccgggtggacctgcgccgcacccggctggagcagatg
ctgaaggtgctggacgtggacggcgcggtccgccgggtccgcggcgggtgggaggccacc
ggccggccgtggagctacgacgcggagcggtacgcggccgtcaccgaggcgcgtgagcgg
gagcagcgcgccatgctcgactacatcgacctcgacacctgccgcatggagttcctgcgc
cgccagctggacgaccccgagagcgtcgcctgcgggcgctgcgacgtgtgcaccggcgag
tactggaacaccgacgtggaccccgggcgccgtgaggccgcggcggagcacctcgaccgg
ccgggcacgcccatcgccccgaggcggcagtggccgtccggcatggacaccctgggcgtg
gggctgaccgggaagatcaaggacgacctccgcgcgggcgaggggcgggccctgggccgc
ctcaccgacatcgggtggggcaacgagctgaggcgcgtgctcgcggacgacgcgccggac
gccccggtggacgagcggatgctccagggcgtcgtacgggtcctcgccacgtggggctgg
gagcgccggccggtcggcgtcgtcgtgatgccgtcccgcacacggcccgccctgatcaac
gacctcgcctcccgcctgtcccggctggggaggctgaccccgatcggggcgctggagtac
ggaggggccgtggagcagaggaagcacaacagcgccatgcgcctggcccaggtgtacgcg
tccctgcgcgtcggcgacgagctgcgcgagcggctggcggcggtccaggccgagacgccc
ggaccggtcctgctggtggacgactacaccgacaccggctggagcctgaccgtgggcgcc
gccctgctcaggagcgcgggcgcccccgaggtgctgccgctgaccctggccaccaccggg
ggctga
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