Streptomonospora nanhaiensis: OUQ99_09530
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Entry
OUQ99_09530 CDS
T08686
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
snah
Streptomonospora nanhaiensis
Pathway
snah00040
Pentose and glucuronate interconversions
snah01100
Metabolic pathways
snah02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OUQ99_09530
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OUQ99_09530
Enzymes [BR:
snah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
OUQ99_09530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
WAE76554
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Position
2175202..2176683
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AA seq
493 aa
AA seq
DB search
MASASAQTGSATGYATQNGGTTGGAGGQTVRATTGTQIHEALCNRPSTSTPIVIEVQGTI
NHGNTSKVSGTGCETADDVIELKKISNVTIVGTGSGAVFDQLGIHIRESSNIIIQNVTVR
NVKKSGSPTSNGGDAIGMESGVRNVWVDHVTLEASGGESEGYDGLFDMKNNTQYVTLSYS
ILRNSGRGGLVGSSESDRSNGYVTYHHNRFENLDSRAPLLRGGVGHMYSNHYADIHESGI
NSRAGARAKVENNYFEDSKDVLGTFYTDERGTWEVGGNVFDNVTWSSPGDSNYPAGPNPQ
STTSVSIPYSYDLDDAGCVPTVLNQTAGAGQGNRVSDGNCEAEEPTDPDPTDPDPTDPDP
TDPDPDPTDPPEGTNLSIGAGADGSGKASGTGYGNVVDGDMGTYWSPSGSTGRVSVKWGS
GTTVSSVNIREAAGAEGNIGSWRLVNHDTGAVLATGRGAGVITFAPTTLRKINFEITGSN
GTPRVAEFETYGG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcatcggcgcagaccggcagcgccacgggttacgcgacgcagaacggcggg
accaccggaggcgcgggcggccagacggtacgggccacgaccgggacccagatccacgag
gccctgtgcaaccggcccagcaccagcaccccgatcgtcatcgaggtgcagggaaccatc
aaccacggcaacacctcgaaggtgtcggggaccggttgcgagaccgccgacgacgtgatc
gagctcaagaagatcagcaacgtcaccatcgtcggcaccggcagcggggccgtgttcgac
cagctgggcatccacatccgggagtccagcaacatcatcatccagaacgtgaccgtccgg
aacgtcaagaagtccggctcgcccacgtccaacggcggtgacgccatcgggatggagagc
ggagtccgcaacgtctgggtcgaccacgtcaccctggaggcgtcgggcggggagtcggag
ggctacgacggcctcttcgacatgaagaacaacacccagtacgtcaccctctcctacagc
atcctgcgcaactccggccgcggcggcctggtcgggtccagcgagagcgaccgctcgaac
gggtacgtcacgtaccaccacaaccggttcgagaacctcgactcgcgcgcgcccctgctc
cgcggcggcgtcgggcacatgtacagcaaccactacgcggacatccacgagtccggcatc
aactcccgggccggggccagggcgaaggtggagaacaactacttcgaggactccaaggac
gtcctgggcaccttctacaccgatgagagggggacctgggaggtcggcggcaacgtcttc
gacaacgtgacctggtccagcccgggcgactcgaactaccccgccgggcccaacccgcag
tccaccacgtcggtgagcatcccgtactcctacgacctcgacgacgccggctgcgtgccg
accgtgctgaaccagaccgcgggcgcgggccagggcaaccgggtctcggacggcaactgc
gaggcggaggagccgaccgacccggacccgacggacccggacccgaccgaccccgacccg
acggaccccgaccccgacccgaccgacccgcccgaggggaccaacctcagcatcggggcc
ggcgccgacggctccggcaaggccagcgggaccggctacgggaacgtcgtcgacggcgac
atgggcacctactggtcgccgagcggctcgaccggccgcgtctcggtcaagtggggctcc
ggcaccacggtgtcctcggtcaacatccgcgaggcggccggggccgagggcaacatcggt
tcctggcggctcgtgaaccacgacaccggcgccgtcctggccaccgggcgcggagcgggc
gtcatcaccttcgccccgacgacgctccggaagatcaacttcgagatcaccggctcgaac
ggcacaccgcgcgtcgccgagttcgagacctacggcggctag
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