Streptomonospora nanhaiensis: OUQ99_19970
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Entry
OUQ99_19970 CDS
T08686
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
snah
Streptomonospora nanhaiensis
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snah03019
]
OUQ99_19970
Enzymes [BR:
snah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OUQ99_19970
Messenger RNA biogenesis [BR:
snah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OUQ99_19970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
MTR4-like_stalk
DEXQc_Suv3
AAA_22
DUF3323
DUF7433
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WAE71505
UniProt:
A0ABY6YGW7
LinkDB
All DBs
Position
complement(4582001..4584841)
Genome browser
AA seq
946 aa
AA seq
DB search
MSSHSERYAAFRRRQAASSPAIEAFQGLYGFEFDPFQVRACRVLENGHGVLVAAPTGSGK
TVVGEFAVHLALSEGTKCFYTTPIKALSNQKYNDLVKRYGADRVGLLTGDNSVNGEAPVV
VMTTEVLRNMLYEGSSTLGGLAYVVMDEVHYLADRFRGAVWEEVIIHLPESVRMVALSAT
VSNAEEFGEWLQQVRGDTTVIVDEKRPVPLWQHVMVGNRVHDLFVDMEEDTGPEEEPDSG
GHRSKGKRKRERRRPQQHREIEVGGQRLRINPSLIRFAEEDSRITQLADRRRHPQSRARG
SIRPRSRFAPPSRTAIIEELDDDGLLPAITFIFSRAGCDDAVRQCVASGLVLTSPEEAAE
IREYAETRCADIPPADLAVLGFDQWLRALEAGISSHHAGMLPTFKEIVEHLFSRGLIRAV
FATETLALGINMPARTVVIEKLDKWNGEAHVRLTPGEYTQLTGRAGRRGIDVEGHAVVVW
QAGTDPEAVASLAGTRTYPLNSSFQPSYNMAVNLVGQVGRRRSRTMLEESFAQFQADRAV
VGLVKQLRKHEEALDGYAKAAECHLGDFMEYASLRRALSDRESVLSKTRSAQRRDEALES
LEKLRPGDIIRIPSGRFSGHAVVLDPGLRHDLPAPLVLTADKQVKRVNASDFTVPVHPSG
RMRIPKSFSAKSPRSRQDLASTLRNKLKERGTDPVYERGGRDAGEDAEVLRLRTALREHP
CHGCADREDHARWAERYFRLSRETDSLRRRVEGRSHVISRTFDRVCGVLEDLEYLSGDSV
SDDGSRLAKIYSELDLLVAECLRRGVWKGLNPVELAACVASLVYEARRNDDAYPRVPSGP
VETTLAEMVRLWGELNEVEARHRVSFLRQPDLGFVWTAHRWARGDRLDDILRQADMPAGD
FVRTAKMLVDMLSQIAGATGDAEVRSTSRKAADLVRRGVVAYSSFN
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcactccgagcggtacgccgccttccgtcggcgccaggccgcctccagcccc
gccatcgaggccttccagggcctctacgggttcgagttcgatccgttccaggtcagggcc
tgccgggtcctggagaacggccacggggtgctggtggccgccccgaccggctccggcaag
accgtggtcggcgagttcgccgtgcacctggccctgtccgagggcaccaagtgcttctac
accacgcccatcaaggccctgtccaaccagaagtacaacgacctggtcaagcgctacggc
gccgaccgggtcggactgctgaccggtgacaacagcgtcaacggcgaggcccccgtggtc
gtcatgaccaccgaggtgctgcgcaacatgctctacgagggctcctccaccctcggcggg
ctcgcctacgtggtgatggacgaggtccactacctcgccgaccgcttccgcggcgcggtg
tgggaggaggtcatcatccacctgcccgagtcggtgcgcatggtggccctctccgcgacc
gtcagcaacgccgaggagttcggcgagtggctgcagcaggtgcgcggcgacaccaccgtc
atcgtcgacgagaagcgcccggtgccgctgtggcagcacgtcatggtcggcaaccgcgtc
cacgacctgttcgtggacatggaggaggacaccggcccggaggaggagcccgactccggc
ggccaccgcagcaagggcaagcgcaagcgcgagaggcgccgcccgcagcagcaccgggag
atcgaggtcggcggccagaggctgcggatcaacccgtccctgatccggttcgccgaggag
gactcccggatcacccagctggccgaccggcggcgccacccgcagtccagggcccggggc
agcatccgcccgcgctcgcgtttcgcgccgccctcccggacggccatcatcgaggaactc
gacgacgacgggctgctgcccgccatcaccttcatcttcagccgcgcgggctgcgacgac
gccgtccgccagtgcgtggcctccggcctggtgctcaccagcccggaggaggccgccgag
atccgcgagtacgcggagacccggtgcgccgacatccccccggccgacctggccgtgctc
ggcttcgaccagtggctccgcgccctggaggcgggcatctcctcccaccacgcggggatg
ctccccacgttcaaggagatcgtcgagcacctgttctcccgggggctcatccgcgccgtg
ttcgccaccgagaccctcgccctgggcatcaacatgcccgcgcggaccgtggtcatcgag
aagctcgacaagtggaacggcgaggcccacgtccggctcaccccgggcgagtacacgcag
ctcaccggccgtgccggacgccgcggcatcgacgtggagggccacgccgtcgtcgtgtgg
caggcagggaccgaccccgaggccgtcgccagcctcgcgggcacccgcacctacccgctc
aactccagcttccagccgtcctacaacatggcggtcaacctggtgggccaggtcggccgc
cggcgcagccgcaccatgctggaggagtccttcgcccagttccaggccgaccgcgccgtg
gtcggcctggtcaagcagctgcgcaagcacgaggaggcgctggacggctacgccaaggcc
gccgagtgccacctgggcgacttcatggagtacgcctcgctgcgccgcgccctgagcgac
cgcgagtccgtgctctccaagacccgttcggcccagcggcgcgacgaggccctggagagc
ctggagaaactgcggccgggcgacatcatccgcatcccgtcgggccgcttctccggacac
gccgtggtgctcgaccccggactgcgccacgacctgcccgcaccgctggtgctcacggcg
gacaagcaggtcaagcgggtcaacgccagcgacttcaccgttcccgtgcatccgtccggg
cggatgcgcatccccaagtccttctccgccaagtcgcccaggtcccgccaggacctggcc
tccacgctgcgcaacaagctcaaggagcgcggcaccgacccggtctacgagcggggcgga
cgcgacgcgggcgaggacgccgaggtgctgcggctgcgcaccgcgctgcgcgagcacccc
tgccacgggtgcgcggaccgcgaggaccacgcccgctgggcggagcggtacttccggctg
agccgtgagaccgactcgctgcgccgccgggtcgaggggcgctcgcacgtcatctcccgt
accttcgaccgggtgtgcggcgtcctggaggacctagagtacctgtccggggacagcgtg
tccgacgacgggtcgcgtctggccaagatctactcggagctggacctgctcgtcgccgag
tgcctgcgccggggggtctggaagggcctcaacccggtggagctggccgcgtgcgtggcg
tccctggtctacgaggcgcgacgcaacgacgacgcctacccccgcgtcccctccggcccg
gtcgagacgaccctcgccgagatggtgcggctgtggggcgagctcaacgaggtcgaggcc
cggcaccgggtgtcgttcctgcgccagccggacctggggttcgtgtggacggcgcaccgg
tgggcgcgcggcgaccggctggacgacatcctgcgccaggcggacatgcccgcgggcgac
ttcgtgcgcaccgccaagatgctggtggacatgctcagccagatcgccggggcgaccggt
gacgcggaggtgcgctccacctcgcgcaaggccgccgacctggtgcgccgcggcgtggtc
gcctactcctcgttcaactag
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