Streptomonospora nanhaiensis: OUQ99_20470
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Entry
OUQ99_20470 CDS
T08686
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
snah
Streptomonospora nanhaiensis
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snah03016
]
OUQ99_20470
Enzymes [BR:
snah01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OUQ99_20470
Transfer RNA biogenesis [BR:
snah03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OUQ99_20470
Prokaryotic type
tRNA splicing ligases
OUQ99_20470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WAE71597
UniProt:
A0ABY6YHB5
LinkDB
All DBs
Position
complement(4703229..4704416)
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AA seq
395 aa
AA seq
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MPYTEVPGDRVPIRMWAAPDGVEAAAMEQLRNVTRMPWVHGLAVMPDVHYGKGATVGSVI
AMRDAVSPAAVGVDIGCGMTAVRTDLTAERLPDDLGRLRSALEAAVPVGFHAHDEPVDPA
TVPTVRETDWTGFWKGFDDLAPAVRPRRTRARRQMGTLGGGNHFLEVCLDDDGAVWLVLH
SGSRNIGKELASHHIEQAQALPHNQDLPDRDLAVFVTGTPEMDAYRRDLFWAQDYARRNR
DVMMGLACRTLVEQIPGTRFEQWISCHHNYVAEETYDGVDVLVTRKGAIRAGSGDLGIIP
GSMATGTYIVRGLGNPASFNSASHGAGRRMSRNKARKTFTEADLVEQTRGVECRKDRGVV
DEIPAAYKDLESVIAAQTDLVEVVAHLRQVVCVKG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccctacaccgaagttcccggtgatcgcgttcccatccgtatgtgggccgcgcccgac
ggggtcgaggccgcggcgatggaacagctgcgcaacgtcacccgcatgccctgggtgcac
ggactcgccgtcatgcccgacgtccactacggcaagggcgccacggtcggctcggtcatc
gccatgcgcgacgccgtcagccccgccgccgtcggcgtcgacatcggctgcgggatgacc
gccgtgcgcaccgacctgaccgccgagcgcctgcccgacgacctcgggcggctccgctcc
gccctggaggcggccgtccccgtcgggttccacgcccacgacgaaccggtcgaccccgcc
accgtccccaccgtgcgggagaccgactggaccgggttctggaaggggttcgacgacctg
gcccccgcggtgcgcccccgccggacccgcgcccggcgccagatgggcacgctgggcggc
gggaaccacttcctggaggtgtgcctggacgacgacggggccgtgtggctggtgctccac
tccggatcgcgcaacatcggcaaggaactggcctcccaccacatcgagcaggcccaggcg
ctgccgcacaaccaggacctgcccgaccgggacctggcggtgttcgtcaccgggaccccg
gagatggacgcctaccgccgggacctgttctgggcccaggactacgcgcgccgcaaccgc
gacgtcatgatgggcctggcctgccggaccctggtcgagcagatccccggcacccgcttc
gagcagtggatctcctgccaccacaactacgtcgcggaggagacctacgacggggtggac
gtcctcgtgacccgcaagggcgccatccgcgcgggctccggcgacctggggatcatcccg
gggagcatggccacgggcacgtacatcgtccgcgggctcgggaacccggcctccttcaac
tccgcgtcgcacggcgcgggccgcaggatgagccggaacaaggcccgcaagaccttcacc
gaggccgacctggtcgagcagacccggggcgtggagtgccgcaaggaccggggtgtggtc
gacgagatcccggccgcctacaaggacctggagtcggtcatcgcggcccagaccgacctg
gtcgaggtggtcgcccacctgcgccaggtggtctgcgtcaagggctga
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