Streptomonospora nanhaiensis: OUQ99_27030
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Entry
OUQ99_27030 CDS
T08686
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
snah
Streptomonospora nanhaiensis
Pathway
snah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OUQ99_27030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snah03000
]
OUQ99_27030
03400 DNA repair and recombination proteins [BR:
snah03400
]
OUQ99_27030
Enzymes [BR:
snah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OUQ99_27030
Transcription factors [BR:
snah03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OUQ99_27030
DNA repair and recombination proteins [BR:
snah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OUQ99_27030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WAE76751
LinkDB
All DBs
Position
6290503..6292071
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AA seq
522 aa
AA seq
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MMDDDQRYRAVHSRDSRFDGVFYTAVRTTGIYCRPSCPAVTPKRVNTRFFPTAAAAQESG
FRACKRCRPDLTPGSPEWNLRADVVGRAMRLIQDGAVDRGGVGALASAVGYSERQLNRLL
SAEVGAGPLALARTERAQTARVLVETTDMPMADVAFAAGFASVRQFNETMQAVFDRSPTE
MRSVGRSRAPGSSAPGTITLRLPYREPIDLASMLGFLGDRAVPGIEEYREGVYRRTLPLP
HGTGVVELSAGSGPGHVLCRLRLTETRDLASAVRRCRRLLDLDADPRAVAEALGGDPLLG
PIVSARPGMRSPGHVDPAELAVRAVLGQQVSVRAARTLAGRLVQRFGKPLAEGLEVPGGG
LTHLFPSPDVLAGADPTGFSIPVARGTALVGLSGAVASGRVDLGPGCDREEAERRLVELR
GIGPWTAGYVRMRGLGDPDVFLHGDLGVRSALEAGRAWTSPAAAARNARGWSPWRSYATH
LLWASLGDAARAREAGAVPDGASADGPSGAVGGVAGRTGSAA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacgacgaccagcgctaccgcgcagtacacagcagggactcccgcttcgacggg
gtcttctacacggccgtgcgcaccaccgggatctactgccgtccgagctgccccgccgtc
accccgaagcgggtcaacaccaggttcttccccaccgcggcggcggcccaggaatccggg
ttccgcgcctgcaagcggtgccgccccgacctgacgccgggctcaccggagtggaacctg
cgggccgacgtggtcggccgcgcgatgcggctcatccaggacggcgccgtggaccggggc
ggcgtgggcgcgctggcctccgccgtggggtacagcgaacgccagctcaaccggctgctg
tccgccgaggtgggcgcggggccgctggccctggcccgcaccgagcgcgcccagaccgcc
cgggtcctggtggagaccacggacatgccgatggcggacgtcgcgttcgcggccgggttc
gcgagcgtgcgccagttcaacgagacgatgcaggcggtgttcgaccgctcccccaccgag
atgcgctcggtcggacgctcccgggcccccggctcctccgcaccggggacgatcacgctg
cggctgccctaccgggagccgatcgacctggcctcgatgctggggttcctcggcgacagg
gccgttcccgggatcgaggagtaccgggagggcgtgtacaggcggacgctcccgctcccg
cacggaaccggtgtcgtggagctctcggcgggttccgggccgggacacgtgctgtgccgg
ctgcggctgaccgagacccgcgacctggccagtgcggtgcgccggtgccgcagactgctg
gacctggacgccgacccgcgtgcggtcgccgaggccctgggcggggaccccctgctcggc
ccgatcgtgtcggcccgtccgggcatgcggtcgcccgggcacgtggacccggcggagctg
gccgtccgtgcggtgctcggccagcaggtgtcggtacgggccgcgcgcacgctggcgggc
cggctggtgcagaggttcggaaagcccctggcggaggggctggaggtcccgggcggcggc
ctgacgcacctgttcccgtccccggacgtgctggccggggccgacccgacgggtttctcc
atccccgtggcgcgcggaaccgccctggtgggactgagcggggccgtcgcctcgggccgt
gtcgacctggggccgggctgcgaccgggaggaggccgagcggcgcctggtcgagctgcgc
ggcatcggtccgtggacggctggctacgtgcggatgcgcggtctgggcgaccccgacgtg
ttcctgcacggcgacctgggcgtccggtcggcgctggaggccggaagggcgtggacctcc
ccggcggcggccgcccggaacgcacgggggtggagcccgtggcgctcgtacgccacccac
ctgctgtgggcgtcgctgggcgacgccgcccgggcgcgggaggcgggagcggttccggac
ggcgcgtctgcggacggcccgtccggggcggtcggcggggtcgcgggccgcaccggttcc
gcggcgtga
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