Streptomonospora nanhaiensis: OUQ99_28390
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Entry
OUQ99_28390 CDS
T08686
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
snah
Streptomonospora nanhaiensis
Pathway
snah00040
Pentose and glucuronate interconversions
snah01100
Metabolic pathways
snah02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snah00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OUQ99_28390
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OUQ99_28390
Enzymes [BR:
snah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
OUQ99_28390
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WAE73039
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Position
complement(6583711..6585000)
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AA seq
429 aa
AA seq
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MRRLILPLAAAVALTAVPATSANAAPDIGREVLADGDGWGSAGAGTTGGSAAAPEHVVTV
STLEEFREAVSGDHPKIVRVEGTVDANTAPDGTPIACEDYAVDGYTLEGYLAAYDPAVWG
WEDPSGPLEEARAASQDVQAEQIRVRVGSNTTVVGAGDDAVISGMNLLVHDVDNVILRNL
SFSDTHDCFPGWDPADGGTGNWNSEYDHVEVSGATNVWVDHNTFDDGDNPGAELPDHFGR
KYEVHDGLLDIVRGSDLVTVSWNDFVERDKAMLLGNSDSRTTDRGRLRVTYHHNHFDGLG
QRAPRVRYGQVHVYNNHYTVRGGLYQYSLGVGVESHVHAENNVFDLHDGIGAEEVLYNWG
GDDIVEHGNAVMRDGRGRLTRVDLVEAYNAANPGMELGTAGTWVPEFAPDVEPVHAVRGL
PRKVGAGLL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggctcatactccccctggccgcggcggtggcgctgaccgccgtgccggccacc
tccgcgaacgccgcccccgacatcggccgggaggtcctggccgacggtgacggatggggg
tccgccggggccgggaccaccggcgggtccgcggcggcgccggagcacgtcgtcaccgtc
tccaccctggaggagttccgcgaggcggtctccggcgaccacccgaagatcgtccgcgtg
gagggcaccgtcgacgccaacacggcgccggacggcaccccgatcgcgtgcgaggactac
gcggtcgacggctacaccctggagggctacctggccgcctacgaccccgctgtgtggggg
tgggaggacccgtccggcccgctggaggaggcccgcgccgcctcgcaggacgtccaggcc
gagcagatccgggtccgcgtcggctccaacaccacggtggtcggcgcgggcgacgacgcc
gtcatctccggcatgaacctcctggtccacgacgtggacaacgtcatcctgcgcaacctc
tccttctccgacacccacgactgcttccccggctgggaccccgccgacggcgggaccggc
aactggaactcggagtacgaccacgtggaggtctccggggccaccaacgtgtgggtggac
cacaacacgttcgacgacggggacaaccccggggcggagctgcccgaccacttcggccgc
aagtacgaggtgcacgacgggctgctggacatcgtccgcgggtccgacctggtcacggtc
tcgtggaacgacttcgtcgaacgggacaaggcgatgctgctcggcaacagcgacagccgg
accacggaccggggacggctccgggtgacctaccaccacaaccacttcgacgggctcggg
cagagggcgccgcgcgtgcgctacggccaggtgcacgtgtacaacaaccactacaccgtg
cggggcgggctctaccagtacagcctgggcgtcggggtggagtcccacgtccacgcggag
aacaacgtgttcgacctgcacgacgggatcggggcggaggaggtcctgtacaactggggc
ggcgacgacatcgtcgagcacggcaacgcggtgatgcgcgacggccgggggcggctgacc
cgggtcgacctggtggaggcctacaacgcggccaaccccggcatggagctgggcaccgcc
ggcacctgggtccccgagttcgccccggacgtggagccggtgcacgcggtgcgcgggctg
ccgcggaaggtgggggccgggctgctctga
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