Spongiibacter nanhainus: I6N98_00985
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Entry
I6N98_00985 CDS
T07977
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
snan
Spongiibacter nanhainus
Pathway
snan02020
Two-component system
snan02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6N98_00985
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6N98_00985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
snan02022
]
I6N98_00985
Two-component system [BR:
snan02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
I6N98_00985
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA_16
HTH_8
FleQ
AAA_2
DUF7317
AAA
AAA_22
OKR_DC_1_N
VpsR
MCM
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QQD18482
UniProt:
A0A7T4R1C0
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All DBs
Position
199880..201223
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AA seq
447 aa
AA seq
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MNTEATLLLVDDDTGLLELLSMRLEAWGYQVVCVESGDDALAVVAEREVDLVLSDLRMDG
LDGLALFEALQQRHPGLPLILLTAHGRVEDAVTATQKGVFGFLTKPVDKDELRKLIDEAL
GQHPRPKDNDWCDDLVYGSAAMQQLLDQAWRVASSPLNIMISGESGTGKEVMARALHRAS
PRHAEPFIAINCSAIPGDLLESELFGHVKGAFSGATRDHEGLFARADGGTVFLDEIGDMP
LALQAKLLRVLQEQVLRPVGGRADRHIDVRVLSATHRDLRRAVKDGGFREDLYYRLNAVE
LTLPALRERPSDIPLLARHFLAVAAERQHTERKQLSPAAMSKLVSYPWPGNIRQLGNIIE
QLVALTPGPVIGDGQVVASLPEEDDGASEIPKFAEARKDFESRYLRRLLTATGGNMTQAA
KCAGRNRSDLYKLIKKHGIDPEQLRSA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgaataccgaggcaaccctgttattggtcgacgacgataccggcttgctagagctgctt
tccatgcggctggaagcctggggatatcaggtggtatgtgttgagagtggcgatgacgcc
ctggcggtagtcgctgagcgggaggtcgacttggtgttgagtgacttgcgaatggacgga
ttggatggcctagcgctgtttgaagcgctgcagcagcgccaccccggcctgccactgatc
ctgctgactgcccacggccgcgtggaggatgcggtaaccgccacccaaaaaggggtattc
ggctttcttaccaagccggtggacaaagatgaactgcgcaagttaatcgacgaagcgctg
gggcagcacccccgccccaaggacaacgactggtgtgacgacttggtctatggcagtgcc
gccatgcagcaactgctggatcaagcttggcgggtggcatccagcccgctaaatattatg
atcagtggcgaaagtggtaccggtaaagaggtgatggctcgagcattgcaccgcgccagc
ccgcgccacgccgaaccttttatcgccattaattgctcggccattcccggtgacctgttg
gagtcggaactgttcggtcatgtcaaaggcgctttcagtggcgccacccgggaccacgaa
ggcttgtttgcccgggccgatggcggcaccgtgttcctcgatgaaattggcgatatgcct
ctggcactgcaggccaagttgctgcgggtgctgcaggagcaggtgctgcgtccggttggg
gggcgggccgaccggcatatcgatgtgcgggtgttatcggccacccaccgggatttgcgg
cgggcggttaaagacggcggctttcgtgaggatttgtactatcggctcaatgccgtagag
ctgacgctgcccgcattgcgggagcgaccctcagatatcccgctactggcccggcatttt
ttagcggtggccgccgagcgtcagcacaccgagcgcaagcagctgtcccctgcggcgatg
tccaagctggtcagttacccctggcccggcaatatccgccagttgggcaatattatcgag
caattggtggcactgacgccggggccggtgatcggcgatggacaagttgtggcgagcctt
cccgaggaggacgacggtgccagcgagatccccaaatttgccgaagccagaaaagacttt
gaatcccgttacctgcgccggttgctcaccgccactggcggcaacatgacccaggcagcc
aagtgtgcgggccgcaatcgctcagacctgtataaactgatcaaaaaacacggcatcgat
ccggaacagcttcgcagcgcctga
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