Spongiibacter nanhainus: I6N98_02575
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Entry
I6N98_02575 CDS
T07977
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
snan
Spongiibacter nanhainus
Pathway
snan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6N98_02575 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snan03019
]
I6N98_02575 (pcnB)
Enzymes [BR:
snan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
I6N98_02575 (pcnB)
Messenger RNA biogenesis [BR:
snan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I6N98_02575 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QQD18772
UniProt:
A0A7T4UQR2
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All DBs
Position
complement(559894..561261)
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AA seq
455 aa
AA seq
DB search
MSSSAVTGLWKKLTGKLAKSGDPDTGPLVVPRDQHSVSRKLISDNALKVMHRLNQANFDA
FLVGGGVRDILLGGHPKDFDVATSATPEQVRKLFRNSRIIGRRFRIVHVRFGREIIEVTT
FRGNHNSPEATSNQKHAMRNEDGMLLRDNVYGSVDEDAIRRDLTINALYYSSRDFCVYDF
VGGLEDLEKRRIRVIGDPETRYREDPVRMLRTVRFAAKLGFDIDAGSEAPMQPLAPMLSD
IAPARMFDEVIKLLMAGSGLATYALMQRYGLFAPLFPQTQHILDSKNPADAELIHHGLSN
TDGRIAEGKPVTPAFLYAVLLWPAVRESQRQLVSEGVPEIPALHQAADQVLSLQQQSVAI
PKRFSLPMRDIWELQFRFPNRRGNRAERLLEQRYFRAGYDFLLLREQCGEIEPGLGQWWQ
AFQEAQPDTRDGMVKHSDSPPPKRRRRRRRPKSPS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgagcgccgtcaccgggctatggaaaaagctaaccggtaaactcgccaaatcc
ggtgacccggataccggccccctggtcgtgccccgcgatcagcacagcgtgtcccgcaag
ctgatcagcgacaacgccctcaaagtcatgcaccgcctcaatcaggccaacttcgacgcg
tttttggtgggcggtggcgttcgcgacatcctgctgggcggtcaccccaaagacttcgac
gtggcgaccagcgccacccccgagcaggttcgcaaactgtttcgcaacagtcgcatcatt
ggccgccgcttccgcattgtccacgtccgcttcgggcgggagatcatcgaggtcaccacc
ttccgcggcaaccacaacagcccggaagcaaccagcaaccaaaaacacgccatgcgcaac
gaagacggcatgttgttgcgggacaatgtttacggcagcgtcgatgaagatgctattcgt
cgcgacctcaccatcaatgctctctactattccagccgcgacttctgtgtctacgacttt
gtcggcggcctggaagatctcgagaagcgccgcatccgggtgattggcgatcccgaaacc
cgctatcgcgaagaccccgtgcgtatgctgcgcaccgtgcgctttgccgccaagttgggc
tttgatatcgacgccggcagcgaggccccgatgcaacccctggcgccgatgctcagcgat
atcgccccggcccgcatgtttgacgaggtcatcaagttattgatggccggcagcggcctg
gccacctatgcgctgatgcagcgctacggtctgtttgcgcccctgtttccccagacccag
cacatcctggacagtaaaaaccccgccgacgccgagctgattcaccacggtctcagcaac
accgacggtcgcattgccgagggcaagccggtgactcccgccttcctctatgccgtgttg
ctgtggccagcggtgcgggaaagccagcgacaactggtatcggaaggggtgccagaaatc
cccgctctgcatcaggcggccgatcaggtgcttagccttcagcaacagagcgtcgccata
cccaagcgcttctctctgcccatgcgcgacatttgggaactgcaattccgcttccccaat
cgccgcggcaaccgagccgaacgattgttggagcagcgctacttccgagccggttacgac
ttcctgctattgcgggagcaatgcggcgaaattgagcccggcctggggcaatggtggcag
gccttccaagaggctcagcccgacacccgcgacggcatggtaaagcacagcgactcaccg
ccgcccaagcgccgtcgccgccgccgccgccccaaatcgccctcatga
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