Spongiibacter nanhainus: I6N98_02775
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Entry
I6N98_02775 CDS
T07977
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
snan
Spongiibacter nanhainus
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snan03009
]
I6N98_02775 (dbpA)
Enzymes [BR:
snan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I6N98_02775 (dbpA)
Ribosome biogenesis [BR:
snan03009
]
Prokaryotic type
rRNA helicases
I6N98_02775 (dbpA)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
Helicase_C_2
AAA_22
DUF7416
Motif
Other DBs
NCBI-ProteinID:
QQD18806
UniProt:
A0A7T4R1N8
LinkDB
All DBs
Position
complement(603094..604479)
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AA seq
461 aa
AA seq
DB search
MSDKAFSSLPLRPELIENLRSLDYTSTTPIQAQSLPLVLAGRDVIAQAKTGSGKTAAFGL
GLLNRLDVKLFRVQSLVLCPTRELADQVAVEIRRLARAIHNIKVLTLCGGTAFGPQLGSL
EHGAHIIVGTPGRVEEHLRKGSLKAKHISSFVLDEADRMLDMGFEETLNKIVDWLPAKRQ
TLLFSATYPDAIESMAKRVLRDPAMVKVDSSHDEQTIPQHFYRVDSNEQRREALRLLLLE
QQPESAVVFCNTRQEVKTVDEQLRGWGFSVLALHGDLEQRERDEMLVRFANKSTTVLVAT
DVAARGLDIDKVALVVNYQVAHDPEVHVHRVGRTGRAGSSGLALTLFSDREAHKLAALNV
DVDPITDALPLPGRAALQKEPPTPPMVTFQIDGGKKQKLRPGDILGALTGEGGIDGKAVG
KIQIFDNRSYLAVAQKDAKRAFKKLSEGKLKGRRFRLRRIA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggcctttagctccctgcccctgcgccccgagttaattgagaatttgcgc
tccctggactacaccagcacgacccccatccaggcccagagcctgccgctggtgctggcc
ggccgggatgtgatcgcccaggccaagaccggctccggcaagaccgcagcctttggcctg
gggctgttaaaccgattggatgtaaaactgttccgggtgcagtctctggtgctgtgccct
acccgcgagctggccgatcaggtggcggtggagattcgccgtctggcccgggccattcac
aatatcaaggtgctgaccctgtgcggcggcactgcctttggcccgcagttgggctctttg
gaacacggcgcccatattatcgtcggcacccccggccgggtggaggagcatctgcgcaag
ggctcgctgaaggccaaacacatcagcagttttgtgttggacgaagccgaccgcatgctg
gatatgggctttgaggagaccctcaacaaaatcgtcgactggctacccgccaagcgacag
acactattgtttagtgccacctaccccgatgctattgagagtatggccaaacgggtactg
cgggatccggccatggtcaaagtggatagcagccacgacgagcagacgattccacaacat
ttctaccgggtagacagcaacgagcaacggcgagaggcactgcggctgctgttgctggaa
caacagcccgagtctgcggtggtgttttgcaatacccgccaggaagtgaaaaccgtggac
gagcaattgcggggctggggctttagtgtactggctctgcatggcgatttggagcagcgg
gaacgggacgagatgctggtgcgctttgccaacaaaagcaccaccgtcttagtggccacc
gacgtcgctgcccgggggctggatatcgacaaggtggccctggtggtgaattaccaggtg
gcccacgaccccgaggtgcatgtgcaccgggtgggtcgcactggccgggccggtagcagc
gggctggcgctgaccctgttcagcgaccgggaagcccacaaactggcagcgctcaatgtg
gatgtagaccccatcaccgacgctctgccattaccgggccgggccgcactacagaaggag
cctccgacaccgccgatggtgacctttcagatcgacggtggcaaaaagcagaaactgcgc
cccggagatatcctcggcgcccttaccggcgagggcggtatcgatggcaaggccgtgggg
aagattcagatattcgacaatcgcagttatctggcagtggcccaaaaagacgccaaacgc
gcatttaaaaagttgtccgaaggaaaactcaagggccggcgttttcggctgcggcggatt
gcctga
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