Spongiibacter nanhainus: I6N98_03480
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Entry
I6N98_03480 CDS
T07977
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
snan
Spongiibacter nanhainus
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snan03021
]
I6N98_03480 (rpoH)
Transcription machinery [BR:
snan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6N98_03480 (rpoH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
GntR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QQD18935
UniProt:
A0A7T4URZ9
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All DBs
Position
complement(770018..770866)
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AA seq
282 aa
AA seq
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MSGHLQPMQQLVPGGDLSAYIQAVGSIPVLSAERERELAEDLHYQGDLEAARQLVMSHLR
FVVHIAKSYSGYGLPQADLIQEGNVGLMKAVKRFDPSKGVRLVSFAVHWIKAEIHEYVLR
NWRIVKVATTKAQRKLFFNLRSAKKQLAWLSNDEAKAVANDLGVDVNEVRRMEGRLSSVD
VGFDADADDESGVVAPVYYLEDKSGDPAAVLEADNWEETSHQALTLAMSELDERSRDILQ
SRWLAESKATLHELADRYGVSAERIRQLEQAAMKKLRASMEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccatctgcagcccatgcagcagctagtaccaggtggtgacctctcggcatat
attcaagccgttggcagtattccggtgctcagcgccgagcgcgagcgcgaactggcggaa
gatctccactatcagggcgacctggaagcggcccgtcagctggttatgtcccacctgcgt
tttgtggtgcacattgccaaaagctacagcggctacggcctgccccaggccgacctgatt
caggaaggcaacgtgggcctgatgaaagccgtcaagcgctttgaccccagcaagggtgtg
cgcctggtgtcttttgccgtccactggatcaaggcggagattcacgagtacgtgttgcgc
aactggcgtattgtcaaagtggccaccaccaaggcccagcgcaaattgttcttcaacctc
cgcagcgcaaaaaaacaactggcctggctcagcaacgacgaggccaaagcggtggccaac
gacctgggtgtggacgtcaacgaagtgcgccgcatggagggtcgtctgagctcggtggat
gtgggttttgacgccgatgccgacgacgaaagtggtgtggtggcgccggtctactacctg
gaagacaaaagcggtgaccctgccgccgtactggaagcggacaactgggaagaaaccagc
caccaagcccttactctggccatgtctgaactggacgagcgcagccgggacatcctgcaa
agccgctggttggccgagagcaaggccacactccacgaactggccgatcgctacggggtg
tctgccgagcgcattcgccagctggagcaggccgcgatgaaaaaactgcgggccagtatg
gaagcctaa
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