Spongiibacter nanhainus: I6N98_03510
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Entry
I6N98_03510 CDS
T07977
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
snan
Spongiibacter nanhainus
Pathway
snan00300
Lysine biosynthesis
snan00470
D-Amino acid metabolism
snan01100
Metabolic pathways
snan01110
Biosynthesis of secondary metabolites
snan01120
Microbial metabolism in diverse environments
snan01230
Biosynthesis of amino acids
Module
snan_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6N98_03510 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I6N98_03510 (dapF)
Enzymes [BR:
snan01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I6N98_03510 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QQD18940
UniProt:
A0A7T4R1Z1
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Position
778585..779415
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AA seq
276 aa
AA seq
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MQLRFTKMHGLGNDFVVIDLITQRFKLKPHHIRKIADRHFGIGCDQVLAVEIPTQPDVDF
RYRIYNAEGSEVEQCGNGARCFARFVRDKRLTGKQQIKVETLGGIIQLEVANNREVRVDM
GEPQLDPKRIPFTADQQAADYALDVAGEQWQVGAVSMGNPHVVLTVDNVDSAPVERLGPI
IESHPRFPQRVNVGFMQVVDRDHVRLRVFERGVGETLACGTGACAAAVSGVVQGRLDDTV
TVDLPGGSLRIHWPGAGQPVIMTGPATTVFEGQIQL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcagctacgctttacgaaaatgcacggcctgggtaatgattttgtggtgatcgatttg
atcacccagcgcttcaaactcaagccccaccatatacgcaaaatcgccgatcgccatttt
ggtatcggttgcgaccaggtcttggcggtggagatccccactcagccggacgtggatttc
cgttatcgaatctacaacgctgagggcagtgaggttgagcagtgtggcaacggcgctcgc
tgctttgcccgttttgttcgggacaaaagactcaccggcaaacagcaaatcaaagtggaa
accctgggcggtattatccagctggaagttgccaacaatcgcgaagtccgggtggatatg
ggtgagccccaattagaccccaagcgtattccctttactgcggatcagcaggcggctgac
tatgccttggatgtggccggcgaacagtggcaagtcggtgcggtatccatgggcaaccct
cacgtggtgctgacagtggacaacgtcgacagtgcgccggtggagcgcctggggcccatc
attgaaagtcatccacgatttccgcagcgggtaaatgtgggctttatgcaggtcgtggat
cgggatcacgtccgcctgcgggtctttgagcgaggagtcggcgagactctggcctgtggc
acgggcgcctgtgccgctgctgtcagtggtgttgtgcaggggcgcttagacgatacggtg
accgtcgacctacccggaggcagcttgcgtatccattggccgggagcgggccagccggtt
attatgacgggtccggccaccaccgtgtttgaaggtcaaattcaactatag
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