Spongiibacter nanhainus: I6N98_04055 Help Entry I6N98_04055       CDS       T07977                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism snan  Spongiibacter nanhainus Pathway snan02020   Two-component system snan02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:snan00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     I6N98_04055  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     I6N98_04055  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:snan03021]     I6N98_04055 Transcription machinery [BR:snan03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      I6N98_04055 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Motif Other DBs NCBI-ProteinID:  QQD19039 UniProt:  A0A7T4R2H2 LinkDB All DBs Position complement(890986..892494) Genome browser AA seq 502 aa AA seqDB search MKQSLQLKVGQQLTMTPQLQQAIRLLQLSTLDLQQEIQSALDSNPLLEVDEDGPDNSDAA ERQSENNAENNTLSETETAKAKTESEATSPDSDSEWAERSDIPEDLPVDSQWDDVFQSSG PATGSTPADDGEFSADYRHGSSDSLQDHLRWQLNLSRLSELDLQIADAIVDAIDEKGRLT ISPEDVVDAINHEDVEIEEVTAVLHLVQQLDPPGVGGRDLQECLTIQLRQLDPETPFLDE AMLIVTQYMAQLGNRDYNQIMRRCRIKEDQLRDVLRLIQSLNPTPGDSIGSDDTEYVVPD VFVSKKEGRWLVELNPDIAPKIQINARYAALAKQSKNSSDNDYIRDNLQEARWFIKSLQS RNETLMKVASKIVEYQRGFLEYGEEAMKPLVLHDIADAVGMHESTISRVTTQKYMHTPRG IFELKYFFSSHVSTDTGGECSSTAIRALIKKLIAAENPRKPLSDSKITELLAEQGIKVAR RTIAKYRESLVIPPSNERKRLV NT seq 1509 nt NT seq  +upstreamnt  +downstreamnt atgaaacaatcgctccagctcaaagtcggtcagcaattgaccatgaccccccagctgcaa caggcgattcgtttacttcagctatccaccctcgatttacagcaagaaattcagtccgcc ctggactcaaacccgcttctggaagtggacgaggacggtccggacaacagcgacgccgcc gagcgccagagcgagaacaacgctgaaaacaacaccctcagcgaaaccgagactgccaag gcaaagacggaatccgaggccaccagccccgacagcgacagcgaatgggcagagcgcagc gatatccccgaggatttgccggtagatagtcagtgggacgacgtgttccaaagcagtggc cccgctactggcagcacccccgccgacgatggtgagttcagcgctgactatcgccacggc agttccgactcgcttcaggatcacctacgctggcagctcaacctgagccgcctctccgag ttggacttacagattgccgacgccatcgtcgatgccatcgacgaaaaaggccgtctcacc atctcccccgaggacgtggtagatgccatcaaccacgaagacgttgagatcgaagaggtc actgccgttctgcacctggtccaacaactggatccgcccggagtcggcggccgagacctg caggaatgcctgaccatacaactgcggcagctggacccggagactccctttctcgatgaa gccatgctgattgtgacccagtacatggcgcagctgggcaatcgggattacaaccaaatt atgcgccgctgccggattaaagaggatcagctgcgggatgtgctgagactgatccaaagc ctcaaccccactcccggcgacagtattggcagcgacgataccgaatacgtggtacccgac gtatttgtcagcaaaaaagaagggcgttggttggtggaactcaaccccgatatcgccccc aaaatacagatcaacgcccgctacgcggcgcttgccaagcagagcaaaaacagtagcgac aacgactacattcgcgacaacctgcaagaggcccgatggtttatcaaaagcctgcagagc cgcaatgaaactctgatgaaagtcgccagcaaaattgtcgaataccaacgcggcttcctg gaatacggtgaagaagcgatgaagccattggtgctgcacgacattgccgacgccgtgggg atgcacgagtccacgatctcacgggtcacaacgcaaaagtacatgcacactcccagaggc atttttgagctgaagtactttttctccagccatgtctccacggataccggcggcgagtgc tcctccaccgccattcgcgccctaattaaaaagctgatcgctgcagaaaacccccgcaaa cccctcagcgacagcaaaatcaccgagctattagccgaacagggtattaaagtggctcgg cgcaccatcgcaaaatatcgggaatcactggtcataccgccctctaacgagcggaaaaga ctggtatag

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