Spongiibacter nanhainus: I6N98_07100
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Entry
I6N98_07100 CDS
T07977
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
snan
Spongiibacter nanhainus
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snan03016
]
I6N98_07100 (rnd)
Enzymes [BR:
snan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
I6N98_07100 (rnd)
Transfer RNA biogenesis [BR:
snan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
I6N98_07100 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
PHBC_N
Motif
Other DBs
NCBI-ProteinID:
QQD20097
UniProt:
A0A7T4R4M8
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All DBs
Position
1570186..1571304
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AA seq
372 aa
AA seq
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MDEQIDFHYIDSDQALSASCQRWQSADFIALDTEFIRTDTFYPIAGLLQVGCLGETALID
PLEIADWSPFLDLLRAPSITKVLHSCSEDFEVFLRLFDCVPTPVLDTQIGAALAGMGVGL
SYQKLVLAVLDIHLEKGETRSDWLQRPLTDNQQLYAALDVFYLQQIYPMLVARLEELGRT
DWWQQEGDLQVASSSPTPPELSYQRLKSLWKLTPRQQLAARMLCEWRETEARRKDVPRGR
ILKDPICQEVARRMPDTTGALASVKDLSPGVVRRNGDTILSLIAAAKDVPEDELPVLAER
PLSREQSQLVKSLRRCCEEVANELALPVEVLTRKRELEAVIRDGELPADVPLWRRQLLTP
CLESANSSAGGE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttggatgaacagatagatttccactacatcgatagcgaccaggccttaagcgccagttgc
cagcgctggcagagcgccgattttatcgctctggataccgagtttattcgcaccgatacc
ttttatcccattgctggcttactgcaggttggctgcctgggtgaaactgcccttatcgac
ccactggagatagcggattggtcgccttttttagacctgctgcgagcgccgtcaattacc
aaggttttgcattcctgcagtgaagattttgaagtctttctgcgcctgttcgactgtgtt
ccaacgccggtgttggacacccaaatcggcgccgcgctggccggcatgggggttggactt
agctatcagaagctggtgctggcggtgctggatattcacctggaaaaaggcgaaacccgc
tcggattggttgcagcgccctctgaccgacaaccaacagctgtatgctgccttggatgtc
ttctacctacagcagatttacccgatgcttgtggcgcgcttggaagagcttgggcgcact
gattggtggcagcaggagggcgatctgcaagtggcgtcatcctcgcctacaccaccggag
ctgtcttaccagcgtcttaagtcgctgtggaagctcactccccgtcagcagttggcggcg
agaatgttatgtgaatggcgggaaacagaagcccgtcgcaaagatgtgcctcggggacgc
attctcaaagatcccatctgtcaggaagtggcccgacgtatgccggataccaccggggca
ctggcatcggtaaaagacttgtcgccgggggtggtacggcgtaacggcgacaccatcttg
tcgctgatagcggcagccaaagacgtcccggaggatgaattgccggtgctggctgaacgc
ccactgagccgggagcagtcccaactggtcaagtcattgcgacgctgctgtgaagaagtg
gccaacgagctggcgcttccggtggaagtattgaccagaaagcgggagttggaggcggtg
attcgcgatggtgaattacccgctgatgtgccgctttggcgtcgacagttgttgacgccg
tgtctcgaatcagcgaacagctcagcgggcggggagtag
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