Spongiibacter nanhainus: I6N98_07605
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Entry
I6N98_07605 CDS
T07977
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
snan
Spongiibacter nanhainus
Pathway
snan03030
DNA replication
snan03430
Mismatch repair
snan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6N98_07605
03430 Mismatch repair
I6N98_07605
03440 Homologous recombination
I6N98_07605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snan03032
]
I6N98_07605
03400 DNA repair and recombination proteins [BR:
snan03400
]
I6N98_07605
Enzymes [BR:
snan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6N98_07605
DNA replication proteins [BR:
snan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6N98_07605
DNA repair and recombination proteins [BR:
snan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6N98_07605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
UvrC_M
Cho_C
GIY-YIG
DUF7508
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QQD19698
UniProt:
A0A7T4URD1
LinkDB
All DBs
Position
1685359..1686870
Genome browser
AA seq
503 aa
AA seq
DB search
MCCDLTGRRDTIAIELIWGINIAVLTELPLALVDLETTGASAKHDRIMEVAVLCRGGGQL
ADTFSTPQTNSWESLIEPGVSIPPFIQGLTGISDGDLADAPTFKDVAEVLWQRLASRILV
AHNARFDLAFLKREFAALGYDYRPKVLCTLKLARALYPQWPRHGLESICGYIDFQTERHH
RAMADVLAMQAFLDYAIADCGEAAVAYHIALQLQMPALPPKLPREQIDAVPSRPGVYRFY
GDNDQLLYIGKSVNMRSRVLSHFSADQHGGKAMKIAQQLRRIEFSETAGEMGALLQESRE
IKQRMPIYNQRLRRQRSLCCVTLEADKEGYDQLHFHAGLPSDILAAGREFAVFRTRKQAR
DYMTDAAADAGLCLQRLGIEKGGRPSRPCFAFQLQRCRGACCGQDPAADYNDRLRGALTS
RMVEAWPYGEPVLLRESGNGGDAAWHLVDRWVYLGVLPPGEPSRDACLSILAEATERDFD
FDSYRILKKFEAELECLPLSSLG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtgatcttaccgggcgccgggataccattgctatcgagttaatttgggggata
aatattgctgtgctgactgagcttccgctcgcactggtggacctggaaaccaccggcgcc
agcgccaaacacgaccgtattatggaggtggcggtattgtgccggggtggcgggcaactc
gccgacactttctcaaccccccagaccaattcgtgggagtctctgattgaacccggtgtt
tcgattcctccttttattcagggtctgaccggtatcagcgatggggatcttgccgacgcg
ccgacattcaaggatgtggcggaagtactgtggcagcgcctggcgtcacggattctggtg
gcccacaatgcccgctttgacttggcttttctcaaacgggagtttgccgcactgggttac
gattaccggcccaaagtgctttgtaccctcaagcttgcccgggccctttacccgcagtgg
ccccgtcacgggctcgagtcgatctgtggatatatcgattttcaaaccgagcgccatcac
cgtgccatggcggatgtgctggcgatgcaggccttcctggattacgccattgccgattgt
ggcgaggcggcggtggcctaccatattgccctgcagctgcagatgcccgcgttaccaccc
aagctgccccgggagcagattgacgccgttcccagtcggcccggggtataccgcttctat
ggcgacaacgaccagctgttgtacatcggcaagagcgtgaatatgcgcagccgggttctg
tcccattttagcgctgaccagcacggcggtaaggcgatgaaaatcgcccagcaattgcgt
cgcatcgagttttcggaaacggccggtgagatgggggcgctgctgcaagagagtcgcgaa
atcaaacagcggatgccgatatacaaccagcgtcttcgacgccagcgcagtctgtgttgc
gtcacccttgaggcagataaggagggctatgaccagctgcacttccacgctggtctgccc
agtgacattctcgcggcggggcgtgaattcgcggttttcagaacccgcaagcaagcgcga
gactatatgaccgatgcggctgcggatgctggcctgtgcctgcaacgtttgggtatcgaa
aaaggggggcgcccatccaggccgtgctttgctttccagctgcagcgctgtcgaggggcg
tgttgcggccaagaccccgctgccgactacaatgatcggctgcgaggggcgctgacttcc
cgaatggtggaggcctggccctatggtgagccggtactgctgagggaatccgggaatgga
ggcgacgccgcgtggcacctggtagaccgctgggtttacctgggcgtgctgccacccggt
gaacccagccgggatgcttgtctatcgatactggcagaggcgacggagcgggactttgat
tttgacagttatcgcatccttaaaaaatttgaggccgagctggaatgcctgcccttatcg
agcctgggctag
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