Spongiibacter nanhainus: I6N98_10060
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Entry
I6N98_10060 CDS
T07977
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
snan
Spongiibacter nanhainus
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snan03032
]
I6N98_10060 (topA)
03400 DNA repair and recombination proteins [BR:
snan03400
]
I6N98_10060 (topA)
Enzymes [BR:
snan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I6N98_10060 (topA)
DNA replication proteins [BR:
snan03032
]
Prokaryotic type
DNA Topoisomerases
I6N98_10060 (topA)
DNA repair and recombination proteins [BR:
snan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6N98_10060 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
CEP104_ZnF
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
QQD16740
UniProt:
A0A7T4QXS8
LinkDB
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Position
complement(2190885..2193563)
Genome browser
AA seq
892 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSDFVVKSSVGHIRDLPTSGSNKSGGVDAKARAKAAAQT
RKMSPEEKARHKKKKAQEQLIARMGIDPNNGWKAKYEILPGKEKVVNELKKLADNADTVY
LATDLDREGEAIAWHLRESIGGDESRYKRVVFNEITKKAIQDAFAHPTDLDINRVNAQQA
RRFLDRVVGYMVSPLLWSKIARGLSAGRVQSVAVRLIVEREKEIRAFVPEEYWQIHTDNR
ADSGQLRLEVKKCRGENFRPGNEDTAMAAVSALQGASYKVAAREDKPTQTKPGAPYITST
LQQAASTRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSNDAVAACRDFIEQSYDKRYL
PDAPQRYSSKEGAQEAHEAIRPSDVNVQPTQLSGMERDAERLYTLIWRQFVACQMTPAEF
TSTSITVEAGDYELRTRGRVVRFDGFMRVQPPAASKKEEDQELPDVAVGDVLELLKVDPS
QHFTKPPPRYSEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVENRRFYAEKMGDIVT
DRLVESFSNLLDYGFTAFMEERLDEVASGDKNWQQLLDEFYADFRATLEKAEAQDGGMRN
NQPTDTDIPCPKCGRHMQIRTASTGVFLGCSGYALPPKERCKQTINLVPGDEFVSIDSDD
DEAESKVLRSKRRCKLCNTAMESYLIDTSRKLHICGNNPDCSGYEIETGSFKVKGYDGPT
IECDKCGAEMQLKTGRFGKYFGCTNEDCKNTRKLLRNGEPAPPKMDPVPMPELACQKVDD
HYVLRDGASGLFLAASGFPRNRETRAPLVKEILPHQKEIDPKYTFLFSAPTEDDKGRDTV
IRYSRKTQEQYVQSEVDGKPSGWSAFYENGAWVPRKKAARKSPAKKKAAKKS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcactggttattgtggagtcgccggccaaggcgaaaaccatcaacaagtac
ctgggttcggattttgtggtgaaatccagcgtgggccatatccgcgacttgcccaccagc
ggcagcaacaagtcggggggggtagatgccaaagctcgagccaaggcggcggcgcaaacc
cgcaagatgtcacctgaggaaaaagcccgccacaagaagaaaaaggcccaggaacagctt
attgcccggatgggtattgaccccaacaacggttggaaagcgaaatacgaaatactgccc
ggtaaagaaaaggtggttaatgagctgaaaaagctcgctgacaacgccgataccgtgtac
ctcgccactgaccttgaccgcgaaggagaggccatcgcctggcatttgcgggagtctatt
ggcggcgacgagagccgttataagcgggtggtgtttaacgagatcaccaaaaaagcgatc
caggacgcttttgcccaccccacagacctggatatcaaccgcgttaatgcccagcaggcc
cgccgtttcctggatcgggtagtgggctatatggtgtccccgctgttgtggtcaaaaata
gcccggggattgtccgctggccgcgtacagtcagttgcggtgcgcttgattgtggaacgg
gaaaaagaaatccgcgcttttgtgccggaagagtattggcaaatccacaccgacaatcgg
gcggacagtggtcagctgcgcctggaggtcaaaaagtgtcgcggcgaaaacttccgcccc
ggcaatgaagacaccgccatggcggcggttagcgcattgcaaggcgccagttacaaggtc
gcggcgagggaagataaacccacccaaaccaagcccggcgcgccgtatatcacctcgacg
ctgcaacaggccgccagtacccggctcggttttggcgtgaaaaaaaccatgatgttggct
caacgcctctatgaagcgggctacatcacctacatgcggactgactccaccaacctcagt
aacgatgctgtggcggcctgccgggattttatagagcagagctacgacaagcgctacctg
cccgacgccccccagcgttacagcagcaaagagggtgcacaggaggctcacgaagctatc
cgcccatctgatgtcaatgttcagcccacccagctctcgggcatggagcgggatgcagag
cggctgtacacactcatttggcgtcaattcgtcgcctgccaaatgacaccggcagagttc
accagtacctccatcaccgttgaggctggcgactacgagctgcgcacccgcggccgtgtg
gtgcgttttgacggctttatgcgggtacaaccgcctgccgccagtaagaaggaagaagat
caggaactgcctgatgtggcagttggtgatgtgctggagctgttgaaggtcgatcccagc
cagcactttaccaagccgccgccccgttactcggaagcggcgctggtgaaagaactggag
aagcgcggcataggccggccctctacctacgcgtcgattatttccaccattcaggaccgg
ggctacgtcaaggtagagaaccggcgtttctatgccgaaaaaatgggcgacattgtcacc
gaccggctggtggaaagcttcagtaatctgctggattacggtttcaccgctttcatggaa
gagcgcttggacgaggtcgcttccggcgacaagaactggcaacagttgttggacgagttc
tacgccgatttccgcgccaccctggaaaaagccgaggcgcaggacggcggtatgcgcaac
aaccagcccacggataccgatattccctgtccaaagtgcggccgtcatatgcagattcgc
acagccagcaccggggtttttctgggctgctcaggttatgccttacctcccaaggagcgc
tgtaaacaaactatcaacctggtgcccggtgacgaatttgtcagcatcgatagcgacgac
gatgaagcggaatcaaaagtgttgcgcagcaagcgtcgctgcaaactctgcaacacggca
atggaaagctacctaattgatacctcacgcaaattgcatatttgcggcaataaccccgac
tgcagtggctacgaaatagaaaccggcagtttcaaggtcaagggctacgacggccctact
attgagtgcgacaaatgcggcgctgaaatgcagcttaaaaccgggcgctttggtaagtac
tttggttgcaccaatgaagactgcaaaaacacccgcaaattactgcgcaacggcgaacca
gcgccgccaaaaatggacccggtacccatgccggagttggcctgccaaaaggtcgacgat
cactatgtgcttagggacggcgcttccgggctgtttttggcagccagcggcttcccccgc
aaccgggaaacccgggcgccactggtgaaggagatattgcctcatcagaaggaaatcgac
cccaagtataccttcctgttctcggcgcctaccgaggacgataaggggcgggataccgtg
atacgctatagccgtaaaactcaagagcagtacgtgcagagcgaagttgacggcaaaccc
agtggctggagtgctttctacgagaacggtgcctgggtgcctcggaaaaaggcagccaga
aaaagtcccgcaaagaaaaaagccgccaaaaaatcgtga
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