Spongiibacter nanhainus: I6N98_11220
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Entry
I6N98_11220 CDS
T07977
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
snan
Spongiibacter nanhainus
Pathway
snan02020
Two-component system
snan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6N98_11220
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6N98_11220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snan03000
]
I6N98_11220
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
snan02035
]
I6N98_11220
Transcription factors [BR:
snan03000
]
Prokaryotic type
Helix-turn-helix
Other families
I6N98_11220
Bacterial motility proteins [BR:
snan02035
]
Flagellar system
Flagellar assembly proteins
Others
I6N98_11220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_30
AAA
HTH_50
AAA_2
HTH_Tnp_ISL3
HTH_1
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QQD20155
UniProt:
A0A7T4R462
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All DBs
Position
complement(2438136..2439125)
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AA seq
329 aa
AA seq
DB search
MRALKDQLHQVADKTVTVLILGPSGAGKEVVAREIHRLSDRAKGPFVPVNCGAIPKDLLE
SELFGHEKGAFTGAIAARAGRFELAEGGTLFLDEIGDMPLDMQVKILRVIQERCFERVGS
ARTRNANVRIVAATHRDLPVLIEEGRFREDLYYRLNVFPLTVPPLAQRTEDLPQLVDDVL
RQLAAEGVGQVSLSARAVAALQAWQWPGNVRELANLLERLCIMYPNQLVEPDQLPEPYLS
AGLDPNSKPQNTAVGGVSTAAGGDTPSPAWLPLPDPDVGMKTALQTVERGWIEQALTQCE
GNVSAAARRLGVRRTTLIEKMRKLAIAAP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgctgaaggaccagctgcaccaggtggcggacaagaccgtcacggtgttgatt
ctcggcccatcgggcgccggcaaggaggtggtggcaagagagatccatcgtctttcagat
cgggccaaggggcccttcgtgccggtaaactgcggggccatccccaaggacctgttggaa
agtgaactctttggtcacgagaagggggcttttaccggtgctattgccgcccgggctggt
cgttttgaattggccgagggcggcacgctgtttttggatgaaattggcgatatgcctctg
gatatgcaggtcaaaatcctgcgagtaatccaagagcggtgttttgagagggtgggctca
gcccgcacccgcaacgccaatgtgcgcattgtggcagcgactcaccgcgacttgccggtg
ctgattgaagaggggcggttcagggaggatttgtactaccgcctgaatgtcttccccctt
acagtaccgccgctggcccagcgtaccgaggatctgccgcaactcgtcgacgatgtactg
aggcaactggccgccgagggcgtcgggcaggtgagcctctcggctcgcgcggtagcggcc
ttacaggcctggcagtggccaggcaatgtgcgggaactggccaacctgctggaacgcctg
tgtattatgtatcccaatcagcttgtggagccagaccagctgcccgagccctatctgtct
gctggtctcgatccaaacagcaagcctcaaaatactgcggtgggcggtgtatcgacagcg
gcagggggggataccccaagccccgcgtggctgccgctgcccgacccagacgtgggtatg
aaaaccgcgttgcagaccgtggagcgagggtggattgagcaggccctgactcagtgcgag
ggcaatgtcagtgctgcggccagaaggctgggagtgcggcgcaccacactgattgaaaaa
atgcgcaaattggcgatcgccgcgccgtaa
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integrated database retrieval system
