Spongiibacter nanhainus: I6N98_11590
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Entry
I6N98_11590 CDS
T07977
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
snan
Spongiibacter nanhainus
Pathway
snan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6N98_11590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
snan02022
]
I6N98_11590
02035 Bacterial motility proteins [BR:
snan02035
]
I6N98_11590
Two-component system [BR:
snan02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
I6N98_11590
Bacterial motility proteins [BR:
snan02035
]
Pilus system
Twitching motility proteins
I6N98_11590
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
QQD17021
UniProt:
A0A7T4QYD7
LinkDB
All DBs
Position
2526692..2528047
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AA seq
451 aa
AA seq
DB search
MNTNTVLIVDDEPDIRELLDITLTRMGLNTLSVGSVQEALDALAEQPHIQLCLTDIRLPD
GSGIDIVKHIQRSYDTVATAVLTAYGSTELAVEALKAGAFDFINKPVSVEQLRNLVKSAL
RLESESRIDSSQHSRLLGETPGIIKLREQIKKLARSQAPVYISGESGSGKEVVARLIHAN
GPRANAAFVPVNCGAIPSELVESEFFGHIKGSFTGAFEDKEGLFEAANGGTLFLDEVADL
PLNMQVKLLRAIQEKAVRRVGSNREIPVDVRILSATHRDLAKEVAAEHFRSDLYYRINVI
EIQVPSLRERAQDIPLLADFILQKIAKDWSVAKPTLSPDALDALRSYPFPGNVRELENII
ERAATLCENDCITPRDLSLPTHTPSDHNTAANVDHLTAARGQFENYIENIEKAVMLAALE
ETQWKKTEAANVLGLTFRQFRYKLKKYQLDE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaacaccgtactcattgtcgatgacgagcccgatatccgcgagctactggat
atcaccctaacccgcatggggctcaatacgctgtcagtcgggtcggttcaggaagccttg
gacgctttggcagaacaaccccatattcagctttgcctgactgatatccgactgccagac
ggctccggtatcgatatcgtcaagcatatacagcgcagctacgacactgttgccactgcg
gtattaacggcctatggcagtacagagcttgctgtcgaggcgctcaaagccggggccttt
gatttcatcaacaagccggtttcggtagaacagcttcgcaacctggttaaatccgcgctg
cgcctggagagcgaaagccgcatcgatagcagccaacattcgcggctgctgggcgaaaca
cccggcatcatcaagctcagagagcagattaaaaaactggcgcgcagccaggcgccggtc
tatatcagcggtgagtccggcagcggtaaagaggtggtggcgcgcctgatccacgccaac
ggcccgagagccaacgccgcctttgtgccggtgaactgcggcgctatacccagtgagctg
gtagagagcgaattttttggtcacatcaaaggcagcttcactggcgcctttgaagacaaa
gaaggcctgtttgaggccgccaatggtggcacccttttcctggatgaagtcgccgatctg
ccactaaacatgcaagtcaaactgctgcgggccattcaggagaaagcggtgcgccgggtg
ggatcaaaccgggagattcccgtggatgtacggattctcagtgctactcaccgcgacctg
gccaaggaagtcgccgcagaacattttcgcagcgacttgtactaccgtatcaacgtgatt
gagatacaggtccctagtctgagggagcgcgcccaggatatccccctgctggcagacttt
atcctgcagaagattgctaaagactggtcagtggccaaacccactttaagcccagacgct
ctggatgcattgcgcagctatcccttccccggcaatgttcgggaactggaaaatattatc
gagcgcgcggctacgttgtgcgaaaacgattgcatcacgccgcgagatctcagcctgcca
acccacacgccttccgatcacaataccgcggccaatgtcgatcaccttactgccgccaga
ggccagtttgagaattacatcgagaatatagagaaagctgttatgttggcagctctggag
gaaacccaatggaagaaaaccgaagcagccaacgtgctaggcctgaccttcagacaattt
cgctataagttgaagaagtatcagctggacgaataa
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