Spongiibacter nanhainus: I6N98_12235
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Entry
I6N98_12235 CDS
T07977
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
snan
Spongiibacter nanhainus
Pathway
snan03030
DNA replication
snan03430
Mismatch repair
snan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6N98_12235 (dnaE)
03430 Mismatch repair
I6N98_12235 (dnaE)
03440 Homologous recombination
I6N98_12235 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snan03032
]
I6N98_12235 (dnaE)
03400 DNA repair and recombination proteins [BR:
snan03400
]
I6N98_12235 (dnaE)
Enzymes [BR:
snan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6N98_12235 (dnaE)
DNA replication proteins [BR:
snan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6N98_12235 (dnaE)
DNA repair and recombination proteins [BR:
snan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6N98_12235 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QQD17134
UniProt:
A0A7T4QYR0
LinkDB
All DBs
Position
complement(2668017..2671499)
Genome browser
AA seq
1160 aa
AA seq
DB search
MLNEQFVHLRVHSEYSLVDSTLRVKDLCKRVASDGMPAVALTDLCNFYALIKFQKAAHGA
GIKPIYGSDLLVRDDDDPDQISTLCLLAQNDRGYRNLTELISRAYLDGQYQGKAYVYCSW
VEEANEGLIALSGGREGDVGQLLLNGKADLARDRLQRWQQFFPQRYYLELQRTGRENEDD
YLHAAVVLASEQQCPVVATNDVRFLNSEDFEAHEARVCIRDSRVLDDPRRPRRYSDQQYL
RSAEEMVELFADIPEALENSVEIARRCNLTIELGTYYLPEYPIPEGMTQDDFFRKLSHDG
LTERLDFLFDRSAPDFAETDKRYRERLDFELDIILQMGFPGYFLIVMDFIQWAKDHDIPV
GPGRGSGAGSLVAYALKITDLDPLQYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIQYV
ADNYGRDAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLDKALEQE
EALREFLEVDEQAQEIWDMAKQLEGVVRGVGKHAGGVVIAPSKLTDFAPLFCDETGSGLV
TQFDKNDVEDAGLVKFDFLGLRTLTIIDWALAIINEQRKKVGEDALDIMAIPLDDRASFD
LLKRAETTAVFQLESRGMKDLIKRLLPDCFEDIIALVALFRPGPLQSGMVDDFINRKHGR
AELAFPHPQYQHECLRPVLQPTYGIILYQEQVMQIAQVMGGYTLGGADLLRRAMGKKKAE
EMEKQRAIFMEGAQGLGYDKNLASNIFDLMEKFAGYGFNKSHSAAYALVSYQTAWLKTHY
PAPFMAAVMSSELDNTDKIVVFIEECRAMGLDYKLPSVNEGEYMFTVNDRGQIVYGLGAI
KGLGEGPVENIIAAREAGGPFKNLFDFCERTDPRKVNKRAIEALIRAGAFDDLGEGREVL
MAAINEAVQVAEQSARNSEAGMTDLFGEALAVDNRDVYESFRNARPWSTRERLQGEKDTL
GLYVTGHPIDDYEADLRRFVPKKIVDLNPDKQPQTVAGLAVNMRTMKNKRGDNMAFVTLD
DRSARIEVAIFSDAFEACREKLVKDAVLVVEGICSHDEYSGGKKMRVKSLRTLAEARQQK
ARELQLSLSAEQVQPAQVENLKSALSSARGGACPVVIRYRREEGEARIRLGDSWRILPQD
DLIFRLKQDYGANNVVINYD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacgaacaatttgtccacctgcgcgtacattccgagtattccctggtggacagc
accctgcgggtcaaggatttgtgcaagcgggtcgccagcgacggtatgcctgccgtggcg
ctgaccgacctgtgtaatttctatgccctgatcaagtttcagaaggcggctcacggcgcc
ggtattaagcccatctatggcagtgatttattggtgcgggacgatgacgaccccgaccaa
atcagcactctgtgtttgctggcccaaaatgaccggggctatcgcaatctcaccgaattg
atctctcgggcttatttggacggccagtaccagggtaaggcctacgtctactgcagttgg
gtcgaggaggccaacgaaggcctgattgccctgtcgggtggccgcgaaggggacgtgggg
cagctgttgcttaacggcaaagccgatctcgctcgggatcgcttgcagcgctggcagcag
tttttcccccagcgttactacctggagttgcagcgtaccggtcgtgaaaacgaggacgat
tacctccacgccgcggtagttctggcatcggaacaacagtgcccggtggtggccaccaac
gatgtccgctttctcaacagtgaggatttcgaggcccacgaggcccgggtgtgtatccgc
gacagccgggtgctggacgatccccgccggccgcgccgctacagcgatcagcagtacctg
cgcagtgccgaagaaatggtcgagctgtttgccgatatccccgaggccttggaaaacagt
gtggaaattgcccggcgttgcaatttgaccattgaactggggacctactacctgccggaa
tacccgattccggagggcatgacccaggacgacttcttccgcaagctgagtcacgatggc
ctcactgagcgcctggactttctcttcgatcgcagtgcgccagactttgccgagaccgac
aaacgctatcgggagcggctggacttcgagctggatatcatcctgcagatgggcttcccc
ggctactttctgatcgtgatggactttatccagtgggccaaggatcacgatattccggtg
gggccgggtcggggctccggtgccggctcgctggtggcctacgcgctgaaaattactgac
ctggacccgctgcaatacgatctgctgttcgagcgttttctcaatcccgagcgggtgtcg
atgcccgactttgacgtcgacttctgtatggaggggcgtgaccgggtcatccagtacgtg
gccgacaactacggccgcgatgcagtcagccagatcattacctttggcaccatggccgcc
aaggcggtggtgcgggacgtcgcccgggtgcagggtaagtcctacggcctggctgacaaa
ctgtcgaagctgatcccctttgaagtgggcatgactctggacaaggctctggagcaggag
gaggcgcttcgggaatttctcgaggtcgacgagcaggcccaggaaatctgggacatggcc
aaacaactggaaggggtggtgagaggtgtcggcaagcacgccggtggggtggtcatcgcc
ccctccaagctcaccgattttgcccccttgttctgtgacgaaaccggcagtggactggtc
acccagttcgacaagaacgacgtcgaagacgccgggctagtgaagttcgactttttgggc
ttgcgtaccctcaccattatcgattgggcgctggccatcatcaatgaacagcgcaagaag
gtgggggaagacgcgctcgatatcatggcgattccgctggatgaccgggccagtttcgac
ctcctcaagcgggccgagaccaccgcggtattccagttggaatcccggggcatgaaggat
cttatcaagcgcctgttgccagactgctttgaagacatcatcgcactggtggcactgttc
cgccccggtcccctgcagtcggggatggtggacgactttatcaatcgtaagcacggccgc
gccgagctggcctttccccacccccagtatcaacacgagtgtctgcggccggtcttgcag
cctacctacggcatcatcctctaccaggagcaggtcatgcagatcgcccaggtgatgggg
ggctacactctgggcggcgccgacctgttgcgccgggcgatgggtaagaaaaaagccgag
gagatggagaagcagcgcgccatctttatggagggtgcgcaaggcctgggctacgacaag
aacttggcctccaatatcttcgacctgatggagaaattcgccggctacggctttaacaag
tcgcactcggcggcctatgccttggtgtcgtatcaaaccgcctggctcaagacccactat
cccgcaccctttatggcggcggtgatgagctcggaactggataacaccgacaagatcgtg
gtgtttatcgaagagtgtcgggccatgggcctggattacaagctgccctcggtgaacgaa
ggtgaatacatgttcaccgttaatgaccggggccagatcgtctatggcttgggcgccatc
aagggtctcggtgagggcccggtggaaaatatcattgccgcccgggaggccggtggcccc
ttcaagaatctgtttgatttctgcgagcgcaccgaccctcgcaaagtgaacaaacgtgcc
attgaggcgttgattcgcgccggtgcctttgacgacctgggcgagggccgggaagtgttg
atggccgccatcaatgaggcagtgcaggtcgctgagcagtccgcccgcaacagtgaggcc
ggcatgaccgacctgtttggtgaggcgctggcggtggacaaccgggacgtctacgagagt
tttcgcaatgcccggccctggagcacccgggaacggctgcagggcgagaaagacacactg
ggcctgtatgttaccggccacccgatcgatgactatgaggccgacctacgccgttttgtg
cccaagaaaattgtcgacctcaaccccgacaagcagccccagacggtagccggactggcg
gtgaatatgcgcaccatgaagaacaagcgcggcgacaatatggcctttgtcaccctggat
gaccgcagtgcccgtatcgaggtggcgatattcagtgatgcctttgaggcctgccgggaa
aagctggtcaaggatgcggtattggttgtggagggcatctgtagtcacgatgagtacagt
ggcggcaagaagatgcgggtgaaatccctgcgcaccctggccgaggcgcgtcagcaaaag
gcccgggagttgcagctgtcgctgtcggcggagcaggttcaacccgcccaggtggaaaac
ctcaagtcggcgctgtcttcggcgcggggcggagcttgcccggtagtgatacgctaccgg
cgggaggaaggcgaggcccgcattcgtttgggggatagctggcgaatcctgccccaggac
gatttgatatttcgcctaaagcaagactatggcgcaaataacgtggtgatcaattacgat
taa
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