Spongiibacter nanhainus: I6N98_13410
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Entry
I6N98_13410 CDS
T07977
Name
(GenBank) ATP-binding domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
snan
Spongiibacter nanhainus
Pathway
snan03420
Nucleotide excision repair
snan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6N98_13410
03430 Mismatch repair
I6N98_13410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snan03400
]
I6N98_13410
Enzymes [BR:
snan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6N98_13410
DNA repair and recombination proteins [BR:
snan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6N98_13410
MMR (mismatch excision repair)
Other MMR factors
I6N98_13410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD_C
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QQD17356
UniProt:
A0A7T4QZ27
LinkDB
All DBs
Position
complement(2940952..2942088)
Genome browser
AA seq
378 aa
AA seq
DB search
MADLEQQIFDHLPGVGPERIDAIKGALDPLEVDLGAQNHRSSGTEIAVFGQDILSGNIRG
APYEGISSLTLNPKTRSQNSRLRMALGALHRAVKRKTGTYARSIAILAHSGATAAKISAA
LNSDEKPVRHSLAFDESESILNARFAAFLLEPKGESNRLNDLACALELLASAKKATGKVS
VSAKWLGWADKAREDKVSKAAFVQNVLSLIDTISQNTLSGDPAKDWNFVKRELRRTRDQD
LVQVARNLDYLVAFNRGRLISAGLGGVWARDGHYTGAREVLESALAQDQILNGVDDPPGI
QVMTIHKSKGKQFDGVIVVRESRHNGKGFESSFVWWGDPAPYRRSRKILRVAVTRAKFHT
LLLQPIFPGCPIVGKHTL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
ttggctgatttagaacagcagatatttgatcatcttcctggcgtgggtccagaacgaatt
gatgcaattaaaggtgccctagatcctctggaagtcgatttaggcgcccaaaaccatcgc
agctcaggaacagaaatagcagtttttggtcaagatattctttcggggaatatcaggggg
gcaccatatgaagggatttcttcactaactctaaaccctaagacgcggagtcaaaatagt
agacttaggatggctctaggcgcattgcatagggctgttaagcgaaaaacaggaacgtat
gcaagaagtatagcaatactagctcactcaggagcgacagcggcaaaaatatcagccgca
ttaaattctgatgaaaagcctgttcgacatagtctcgcgtttgatgagtctgagtcgata
ctaaatgctaggtttgctgcttttttgttagaaccaaaaggcgagtctaatcgtttaaac
gatctggcttgtgctctagagttgttagcttcggccaagaaggccactggaaaagtgtca
gtttcggctaaatggctagggtgggctgataaggctagagaggacaaggtttctaaggct
gcatttgttcaaaacgttcttagcttgattgataccataagccaaaatactctgtcgggt
gatccggctaaggactggaattttgttaagagggaacttcggcgaacccgtgaccaagat
ttagtccaggttgcacgaaacttagattatttagtggcgttcaacagaggccgccttata
agtgcggggctgggaggtgtgtgggcacgggatggacactataccggtgcgagagaagtc
cttgaaagcgctctagctcaagaccagattctcaacggagttgatgatcctccgggtatt
caggttatgacaatacacaaatctaaaggcaagcaatttgacggtgttattgtcgttaga
gaatctcgccataatgggaaaggtttcgagtcttcctttgtgtggtggggagatccggcg
ccctatagacgtagtcgtaaaatactacgggtcgcagttacaagggcgaaatttcatact
ttactgcttcaacctatatttccgggctgcccaattgtcgggaagcatacgctgtaa
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