Spongiibacter nanhainus: I6N98_15265
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Entry
I6N98_15265 CDS
T07977
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
snan
Spongiibacter nanhainus
Pathway
snan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
I6N98_15265 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snan03019
]
I6N98_15265 (orn)
03009 Ribosome biogenesis [BR:
snan03009
]
I6N98_15265 (orn)
Messenger RNA biogenesis [BR:
snan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6N98_15265 (orn)
Ribosome biogenesis [BR:
snan03009
]
Eukaryotic type
Pre-60S particles
RNases
I6N98_15265 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QQD17687
UniProt:
A0A7T4QZV6
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All DBs
Position
complement(3326357..3326899)
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AA seq
180 aa
AA seq
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MTKEMNLIWIDLEMTGLDTQNDHIIEIATVVTDGDLNIIDEGPVFAIHQSDDVLDAMDEW
NTRQHEQSGLTKRVRDTCMTAEEAERLTLDFLRKHVDEGVSPMCGNSICQDRRFLAREMP
KLEAYFHYRNLDVSTIKELARRWQPDLLDGVKKNGAHLALEDVKDSIEELKHYRAYFFKQ
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagatgaatctgatctggatcgacctggaaatgaccggattggacacccag
aacgaccatatcatcgagattgccacggtggtgaccgatggtgacctcaatatcatcgac
gaggggccggtgtttgccattcaccaaagcgacgacgttctggatgcaatggatgagtgg
aacacccgccagcacgagcagtccggccttaccaagcgggttcgagacacctgtatgacc
gccgaggaggcggagcgtttaaccctggatttcttgcgcaagcatgtggatgaaggggtg
tcgccaatgtgtggcaacagcatctgccaggatcgccgtttcctggcccgggagatgcct
aagctggaagcctacttccactaccgcaatttggatgtcagcaccatcaaagaactggcc
cggcgttggcagccggacctgctggatggcgtgaaaaaaaatggcgcccacctggccctg
gaagacgtgaaagactccattgaagaactcaagcactaccgggcctacttcttcaaacaa
taa
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