Spongiibacter nanhainus: I6N98_15360
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Entry
I6N98_15360 CDS
T07977
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
snan
Spongiibacter nanhainus
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snan03016
]
I6N98_15360 (truB)
Enzymes [BR:
snan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I6N98_15360 (truB)
Transfer RNA biogenesis [BR:
snan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I6N98_15360 (truB)
Prokaryotic type
I6N98_15360 (truB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QQD17704
UniProt:
A0A7T4QZW2
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All DBs
Position
complement(3348960..3349889)
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AA seq
309 aa
AA seq
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MARRRKGRPVSGILVLDKPAGKSSNGAMVVCRAIYNASKAGHTGALDPLATGVLPICFGE
ATKFSQFLLDADKGYLSTFVFGERRSTGDAEGEVVDEGDASALTAADVEGAMQGLRGRIS
QVPPMYSALKRDGKPLYQLARQGIEVERKARDVEISRFELLDFRPGRRAEADVLVHCSKG
TYIRSLAEDLGATLETGAYVGQLRRSAAGPFALDQAYSIDAIQALRDRQAFAELDELLLP
VDAGLEHLSLCELGETAAHYLSQGQPVQVPSAPLKGPVRLQGPDGVFLGIGDILDDGRVA
PKRLISAAS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtggctcgacgtcgaaagggtcgcccggtcagcggcattcttgttttggacaaacctgcg
ggcaaatcctcaaatggcgccatggtggtatgccgggcgatctacaatgccagtaaagcc
ggccataccggcgcactggatccgctggctaccggggtgttgccaatttgcttcggtgaa
gccaccaagttttcccagtttctcctcgatgctgataagggttacctcagcacttttgtt
tttggcgagcggcgcagtacgggcgacgccgaaggcgaggtggtagatgaaggagatgcc
tctgccttgacagccgccgatgttgaaggggcgatgcaggggctcagggggcggatatcc
caagtgccgcccatgtactccgctctaaagcgcgatggcaaacccctctaccagctggct
cgccagggtattgaagtggagcgtaaggctcgcgacgttgagatcagtcgtttcgaactg
ctcgattttcgccccggtcgccgcgctgaggccgatgtgttggtgcattgcagcaagggc
acctatattcgcagtctcgccgaggacttgggggcgaccctggaaaccggggcctacgtt
gggcagttacgccgcagtgccgccgggccatttgcgctggatcaagcctattcaatcgac
gctattcaggcgctgcgagatcgacaggcctttgccgagctggatgaactattgctacca
gtggatgccggtctggagcacctttccctctgtgagcttggtgagacggcggcccattac
ctcagtcaggggcagccggtacaggtgccgtcggcaccgctcaaggggccggtgcgacta
cagggcccggatggcgtgtttttgggcatcggcgatattcttgacgatggccgtgtagct
cccaagcgcttgatttcagctgcgtcttaa
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