Spongiibacter nanhainus: I6N98_18200
Help
Entry
I6N98_18200 CDS
T07977
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
snan
Spongiibacter nanhainus
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snan02000
]
I6N98_18200
Transporters [BR:
snan02000
]
Other transporters
Pores ion channels [TC:
1
]
I6N98_18200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
Opacity
DUF748
Toluene_X
Surface_Ag_2
Motif
Other DBs
NCBI-ProteinID:
QQD18240
UniProt:
A0A7T4R0M7
LinkDB
All DBs
Position
complement(4013666..4015261)
Genome browser
AA seq
531 aa
AA seq
DB search
MSNHFKSAVAAGVMLATAAGAATAAEEEKGFYIGGNAFYTDVFDADGKVSTPGAGSPLDA
IPVLGPILGGLLGGGSAAASANVETTFDEDFGYGVVFGYKYASPWRGELEYRIGENDVDS
VSGGGLTFEGNSTLETESLMANFWYDFNQGERLRPYLGFGVGMANYDLGGADDDVVIGQL
GAGLNFHLTPRLVLDAGYRYAMADDPELKYDNAKLETEYEAQSLLVGLRYNFFDAQYGVQ
DEDGDGVIDENDQCPGTPAGVQVDSTGCPLDGDNDGVADYLDQCPNTPAGVEVNAEGCAL
DTDGDGVIDVNDVCPDTPAGTPVMSNGCGEQQSVVLRGVNFELDSAQLTANAETILDDVT
ETLNTSPGFDVEIQGHTDSTGSDSYNMNLSQNRAQSVKNYLVQGGVDSSRLTARGYGEDM
PVASNDTREGRAENRRVELKVVGESDVMVEEEPMMDDEPMMDDDVMGEPAMDDMSDDSAS
EEEYEYFYEPLSDDSMDDESMEDDMSDEADAMEESAEEEADDSDYDIDYDF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccattttaagtccgccgtggcggcaggcgtcatgttggcgactgcagctggt
gcggcgactgctgctgaagaagaaaagggattctatatcggcggtaacgccttctacacc
gatgtattcgacgccgacggtaaagtatctaccccgggtgcgggcagcccgctggatgcc
attccagttttgggccccatccttggcggcttgctcggtggtggcagcgcggctgcttca
gccaacgttgagaccaccttcgacgaagattttggctacggcgtggtgttcggttacaag
tacgccagcccctggcgcggcgaactggaataccgcatcggcgaaaatgacgtcgacagc
gtttctggcggcggcctgactttcgagggtaacagtaccctggaaactgagagcctgatg
gccaacttctggtacgacttcaaccagggtgagcgcctgcgcccctacctgggttttggt
gtcggtatggccaactacgacctgggtggtgcagatgacgatgtggtcatcggccaattg
ggtgctggtcttaactttcacctgacccctcgcttggtattggatgccggttatcgctac
gcgatggcggatgaccccgagctgaagtacgacaacgccaaactggaaactgagtacgaa
gcacaaagcctgctggttggtctgcgctataacttctttgacgctcagtacggcgtgcag
gatgaagacggcgacggcgtgatcgacgagaacgatcagtgccccggcaccccagctggt
gttcaggtggacagcaccggttgcccgctggacggtgacaacgacggcgttgccgactac
ctggatcagtgccccaacacaccggctggcgttgaagtgaatgctgaaggctgtgcactg
gacactgacggtgacggcgtgatcgacgtcaacgatgtgtgcccggatacacctgccggt
actccggttatgtccaacggttgtggcgaacagcagtctgttgtgctgcgcggtgtgaac
tttgagctggacagcgcgcaactgaccgccaatgccgagaccattcttgacgatgtgact
gaaaccttgaacacctcgcctggctttgatgtggaaatccagggtcacaccgactccact
ggcagcgacagctacaacatgaacctgtcgcaaaaccgtgcccagtcagtgaaaaactac
ctggtgcagggcggtgtggatagctctcgtctgacagcacgcggctacggtgaagatatg
ccggtagccagcaacgatacccgtgagggtcgtgctgaaaaccgccgcgtcgagctgaag
gttgttggcgagtctgatgtcatggttgaagaagagccgatgatggatgacgagccgatg
atggacgacgacgtcatgggtgagccggcgatggacgatatgtctgacgacagcgcgtct
gaggaagagtacgagtacttctacgagccgctgtctgatgattctatggacgacgagtcc
atggaagatgacatgagcgacgaagccgatgcgatggaagagtccgctgaagaagaagca
gacgactctgactacgatatcgactacgacttctaa
DBGET
integrated database retrieval system
