Sphingomonas naphthae: PQ455_00325
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Entry
PQ455_00325 CDS
T08850
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snap02000
]
PQ455_00325
Transporters [BR:
snap02000
]
Other transporters
Pores ion channels [TC:
1
]
PQ455_00325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
BBP2
Motif
Other DBs
NCBI-ProteinID:
WCT73712
LinkDB
All DBs
Position
complement(57298..59436)
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AA seq
712 aa
AA seq
DB search
MLHAHTRHLALTSALALSLCPALVLAAPATVAPAPEVSDPDEIVVTAAGFEQKIRDAPAS
ISVLNRAELQERRFGSLAEALTNVEGIDVGQTAGKTGGLNISIRGMPSDYTLILVDGRRQ
NAPGNVTPNGFGETSTSFLPPFSAIDRIEVVRGPMSTLYGSDAMGGVVNLITRKVGTRWA
GTVTGEATLQEDGQFGNIYSGNAYLHGPLVRDLIGLSVRGSYFRREAADITYETITGTEA
EVSKRGPAPVKSRTHTLGGRLSMTPHVDHDLWFEADINRQWYDNSDSQLGTGTVQGGYGP
EMRFNRDNYVLAHSWRAGFAQIDTTLTRNITETFGRTIPPGTPGKVAGDPRGLTATNSIA
DSRAVVPLGPVTATVGGQYWQAEMVDGVAVDKYEFVQWALFGEAEVKLVDRFKVTLGARY
DDHETFGGKLSPRIYAVWNTSDAFTVKGGVSRGFKTPRLDQIAPGIVGFGGQGTIPLIGT
PGLKPETSTSMEVGVYYDDGGVVSGNATVFNNRFKDKIATGAPIPNCTWSVQRNRPGCLD
LGEFPRAENFGQTVNVDKAVTRGGEVAVKFAFTPAVSLSLNYTYTESEQKSGTEAGEPLV
NTPRHMVNGNLRWKLTDALTTWARSEIRSKRYRGRGAEQTALGSYKGYALFHLGANYQLT
PVIRLGAALYNVFDKDFTGFLPYQSGTQTIYASAYTNLQEPRRLWLSATVDF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacgcccatacacgccatctggcgctgaccagcgcgcttgcgctgtcgctctgc
cccgccctcgtgctggccgcaccggcgacggtggcgcccgcgcccgaggtgagcgacccc
gacgaaatcgtggtgaccgccgccggcttcgagcagaagatccgcgacgcgccggccagc
atcagcgtgctcaatcgcgccgaattgcaggagcgccgcttcggcagcctcgccgaggcg
ctgaccaacgtggaagggatcgacgtcggccagacggcgggcaagaccggcgggctcaac
atctcgatccgcggcatgccgagcgattacacgctgatcctggtggatggacgccgccag
aacgcgccgggcaacgtaacgcccaacggcttcggcgagacctcgaccagcttcctgccg
cccttctccgcgatcgaccggatcgaggtggtgcgcgggccgatgtcgacgctctacgga
tcggacgcgatgggcggcgtggtcaacctcatcacccgcaaggtcggcacgcgctgggcg
ggcaccgtcaccggcgaggcgacgcttcaggaggatggccagttcggcaacatctattcg
ggcaacgcctatctgcatgggccgctggtcagggatctgatcggcctttcggtgcgcggc
agctatttccgccgcgaggccgccgacatcacctacgagacgatcaccggcaccgaagcg
gaggtgagcaagcgcgggccggcaccggtcaagtcgcgcacgcacaccttgggcggccgc
ctgtcgatgaccccgcatgtcgatcacgacctctggttcgaggcggatattaaccggcaa
tggtatgacaattcggactcgcagctcggcaccggcacggtgcagggcggttacggcccg
gagatgaggttcaaccgggacaattatgtgctggcgcacagctggcgcgcgggcttcgcg
cagatcgacacgaccctgacgcgcaacatcaccgagacgttcggccgcaccatcccgccc
ggcacccccggcaaggtcgccggcgatccgcgcggcttgacggcgaccaacagcatcgcc
gacagccgcgcggtcgtgccgctggggcccgttaccgccaccgtcggcgggcaatattgg
caggccgagatggtcgatggcgtcgccgtcgataagtacgaattcgtccagtgggcgctg
ttcggcgaggccgaggtgaagctggtcgatcgcttcaaggtgaccttgggcgcgcgctac
gacgatcacgagacgtttggcggcaagctctcgccgcgcatctacgcggtgtggaacacc
agcgacgccttcaccgtgaagggcggggtcagccggggcttcaagacgccgcgcctcgac
cagatcgcgccgggcatcgtcggcttcggcgggcagggcaccattccgctgatcggcacg
ccggggctgaagcccgagaccagcacctcgatggaagtgggcgtctattatgacgacggc
ggcgtcgtcagcggcaacgccactgtcttcaacaaccgcttcaaggacaagatcgcgacc
ggcgcgccgatccccaactgcacctggagcgtgcagcgcaaccgaccgggttgcctcgat
ctcggcgaattcccgcgcgcggagaatttcggccaaacggtcaacgtggacaaggcggtg
acgcggggtggcgaagtggcggtgaagttcgccttcacgccggccgtctcgctatcgctc
aactacacttataccgaaagcgagcagaagagcggcacggaggcgggcgagccgctggtc
aacacgcccaggcatatggtgaacggcaatctgcgctggaagctgaccgacgcgctgacg
acctgggcgcgctccgaaatccgatcgaagcgctatcgcgggcgcggcgcggagcagacg
gcgctgggcagctacaagggctatgcgctgtttcacctgggcgccaattaccagctaacc
ccggtgatccgcctgggcgccgcactctacaatgtgttcgacaaagatttcaccggcttc
ctgccctatcagagcgggacgcagacgatctacgcctcggcctacaccaacctgcaggag
ccgcgccggctctggctatcggcgacggtggatttttag
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