Sphingomonas naphthae: PQ455_00935
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Entry
PQ455_00935 CDS
T08850
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
snap
Sphingomonas naphthae
Pathway
snap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQ455_00935 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_00935 (ung)
Enzymes [BR:
snap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PQ455_00935 (ung)
DNA repair and recombination proteins [BR:
snap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PQ455_00935 (ung)
Prokaryotic type
PQ455_00935 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WCT73828
UniProt:
A0ABY7TLB7
LinkDB
All DBs
Position
complement(195776..196492)
Genome browser
AA seq
238 aa
AA seq
DB search
MGDIRLHQSWKRPLGAEFASPYMADLRAFLVAEKAAGKAIFPAGGEWFRALDLTPLDTVR
VVILGQDPYHGPGQAHGLCFSVRPGVRPPPSLVNIYKELHSDLGLARPAHGFLEHWARQG
VLLLNSVLTVESGRAASHRDRGWEKFSDAVIRLVAARPDPVVFLLWGSYAQKKAGFVRSI
AQGGHHLVLKAAHPSPLSAHNGFFGCRHFSQTNAFLESRGLPPIDWALPPVAADPAGH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatatcagactgcaccaaagctggaagaggccgctcggcgccgaattcgccagc
ccctacatggccgatctgcgcgccttcctcgtcgccgagaaagcggcgggcaaggcgatc
ttcccggcgggcggcgaatggtttcgcgcgctcgatctgacgccgctcgatacggtgcgc
gtcgtgatcctcgggcaggatccctatcatgggccggggcaggcgcatggcctgtgcttc
agcgtgcggccgggcgtccgcccgccgccgtcgctcgtcaacatctacaaggaattgcac
agcgatctggggctggcgcggccggcgcacggtttcctcgaacattgggcgcggcagggc
gtgctgctgctcaacagcgtgctgaccgtcgagagcggccgcgccgcctcgcaccgcgat
cgggggtgggaaaagttcagcgacgcggtgatccggctggtggcggcgcggcccgatccg
gtcgtgttcctgctgtggggcagttacgcgcagaagaaggcggggttcgtccgctcgatc
gcacagggcgggcatcatctggtgctgaaggcggcgcatccctcgccgctgtcggcgcac
aacggcttcttcggctgccgccatttctcccagaccaacgcttttctggaatcgcgcggg
ctgccgccgatcgactgggcgcttccccctgtcgcggccgaccccgccggccattga
DBGET
integrated database retrieval system
