Sphingomonas naphthae: PQ455_01945
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Entry
PQ455_01945 CDS
T08850
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
snap
Sphingomonas naphthae
Pathway
snap00470
D-Amino acid metabolism
snap00550
Peptidoglycan biosynthesis
snap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PQ455_01945 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PQ455_01945 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snap01011
]
PQ455_01945 (murD)
Enzymes [BR:
snap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PQ455_01945 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
snap01011
]
Precursor biosynthesis
Amino acid ligase
PQ455_01945 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
adh_short
NAD_binding_2
adh_short_C2
TrkA_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
WCT74018
UniProt:
A0ABY7TLZ3
LinkDB
All DBs
Position
complement(385725..387074)
Genome browser
AA seq
449 aa
AA seq
DB search
MIVSPAFAGRRYGVLGLARSGLATVRALLASGAEVVAWDSNEAAVDALAAEFASEGARLM
LADFTAWDDLRRMTAIVVSPGVPLNRHPLKPRADAQGVPVIGDIELFSQARPDLPAHRIV
GITGTNGKSTTTALIHHILESAGYDARLGGNIGLPILGQEPLAAGGIYVLELSSYQIDLS
FSLDCDVAVLLNITPDHLDRYDAGFAGYAAAKARLFTMQDVAHEAVIVVDDDVTRLIAVN
ERTRRDGSGHLSLVRGADAAGQQAWPALQGPHNAQNAAAAIEACRALDVPEAAIAAGLAT
YPGLPHRMERVAQIDGVLYVNDSKATNATSVAPALAAYKGIHWILGGVAKTAELDACEPH
FDHVRAAYTIGDAGAMFARLLAGKVPVDECHTLDAAIEAAAEAARPGEVVMLSPACASFD
QYRDYEHRGAAFRVAVARLMDAPREAPAP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcagcccggccttcgcggggcggcgctacggcgtcctcggcctcgcccggtcg
gggctggcgaccgtgcgcgcgctgctggcgagcggcgccgaggtggtcgcgtgggattcg
aacgaggccgccgtcgatgcgctggcggcggagttcgccagcgagggcgcgcggctgatg
ctcgccgacttcaccgcatgggacgatcttcgccgcatgaccgcgatcgtcgtatcgccg
ggcgtgccgctcaaccgccatccgctgaagccccgcgcggacgcgcagggcgtgccggtg
atcggcgatatcgaactgttctcgcaggcccggcccgacctgccagcccaccgcatcgtc
ggcatcaccggcaccaacggcaaatcgaccacgacggcgctgatccaccacattctcgaa
agcgcgggctatgacgcgcggctgggtggcaacatcggcctgcccatattggggcaggaa
ccgctggcggcgggcggcatctatgtgctggaactgtcgagctaccagatcgacctgagt
ttcagcctcgattgcgacgtggcggtgctgctcaacatcacgcccgaccatctcgaccgc
tatgacgcgggcttcgccggttatgccgccgccaaggcgcgcctgttcaccatgcaggat
gtcgcccacgaggccgtgatcgtggtggacgacgacgtgacccgcctgatcgcagtcaac
gagcgcacccgccgcgatggctccggccacctctcgctggtgcgcggcgcggatgcggcg
ggccagcaggcgtggccggcgctgcaaggcccgcacaacgcgcagaacgccgccgccgcc
atcgaagcctgccgcgcgctcgacgtgcccgaggccgcgatcgccgccggcctcgccacc
tatcccggcctgccccaccgtatggagcgggtcgcgcagatcgatggcgtcctctacgtc
aacgacagcaaggcgaccaacgccacgtcggtcgcccccgcgctcgccgcctacaagggc
atccactggatcctgggcggggtcgccaagacggccgagctggacgcctgcgagccccat
ttcgatcatgtccgcgcggcctatacgatcggcgatgccggggcgatgttcgcccggctg
ctggcgggcaaggtgccggtggacgaatgccacacgctcgacgccgcgatcgaggcggcg
gccgaggcggcgcggcccggcgaggtggtgatgctctcccccgcctgcgcctcgttcgat
caatatcgggattacgagcatcgcggcgccgccttccgcgtcgccgtcgcgcggctgatg
gacgccccccgcgaggcaccggccccgtga
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