Sphingomonas naphthae: PQ455_02190
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Entry
PQ455_02190 CDS
T08850
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snap03016
]
PQ455_02190 (truB)
Enzymes [BR:
snap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PQ455_02190 (truB)
Transfer RNA biogenesis [BR:
snap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PQ455_02190 (truB)
Prokaryotic type
PQ455_02190 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WCT75370
UniProt:
A0ABY7TSI8
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All DBs
Position
433418..434452
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AA seq
344 aa
AA seq
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MALSVLDGWIILDKPLGLGSTQGVSAVKRVARQCGLGKVKVGHGGTLDPLATGVLPIALG
EATKLTGRMLDADKTYDFTIAFGTQTDTLDLEGAVIATSDARPTMADVAAVLARFTGPIA
QVPPAYSALKVDGARAYDLARAGEEVVLASRNVTVHSLTILPGTGRGTAAEGGGGGGSPP
AQRFGDSPLHQPAAGPPPRAGEELAAITLSATVSKGTYIRSLARDIALALGTVGHVSMLR
RTRAGPFTLDQAISLDNLNQAATARALEDVTLPMTAGLDGIPALSVSRDQAGALRQGRIL
RGMPATPGLNLAVEDDLPVALVEAIDGEIRVVRGFNLMPKETIS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagcgtgttggacggctggatcatcctcgacaagccgctcgggctgggatcg
acgcagggcgtgtcggcggtgaagcgggtcgcgcgccagtgcgggctgggcaaggtgaag
gtgggccacggcggcacgctcgatccgctggcgaccggcgtgctgccgatcgcgctgggc
gaggcgaccaagctgaccgggcggatgctcgacgccgacaagacctacgacttcaccatc
gccttcggcacgcagaccgacacgctcgatctggaaggggccgtgatcgcgacgagcgac
gcgcggccgacgatggcggacgtcgcggcggtgctggcgcgcttcaccgggccgatcgcg
caggtgccaccagcctattcggcgctgaaggtggatggcgcgcgcgcatatgatctggcg
cgagcgggcgaagaggtggtgctggccagccgcaacgtgacggttcactctcttaccatc
ctccccggcacggggagggggaccgccgccgaaggcggtggtggagggggctcgccacca
gcgcagcgcttcggggatagccccctccaccagcctgcggctggtccccctccccgtgcc
ggggaggagctggcggccatcaccctttccgccacggtctcgaagggcacctatatccgc
agcctcgcgcgcgatatcgcgctggcgctcggcacggtcggccatgtcagcatgttgcgg
cggaccagggcggggccgttcacgctggatcaggcgatttcgctggacaatctgaaccaa
gccgctactgcccgcgcgcttgaagatgtgaccttgcccatgacggcggggctggacggt
atcccggctctctccgtttcccgcgatcaggcaggcgcgctccgacaggggcgtatctta
cgcgggatgcctgcgacaccgggcctcaacctcgccgtggaagacgatcttcccgtggcg
ctggtggaggccatcgacggagaaatccgggtggtgcggggcttcaacctgatgccgaag
gaaacgatatcatga
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