Sphingomonas naphthae: PQ455_02200
Help
Entry
PQ455_02200 CDS
T08850
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
snap
Sphingomonas naphthae
Pathway
snap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ455_02200 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snap03019
]
PQ455_02200 (pnp)
03016 Transfer RNA biogenesis [BR:
snap03016
]
PQ455_02200 (pnp)
Enzymes [BR:
snap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PQ455_02200 (pnp)
Messenger RNA biogenesis [BR:
snap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PQ455_02200 (pnp)
Transfer RNA biogenesis [BR:
snap03016
]
Prokaryotic type
tRNA degradation factors
PQ455_02200 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WCT74064
UniProt:
A0ABY7TQD6
LinkDB
All DBs
Position
435002..437329
Genome browser
AA seq
775 aa
AA seq
DB search
MFDIKKSEIQVGGKTITLETGRVARQADGAVLATMGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEILCIAQVLSY
DGENEPDILAMIAASAALTISGVPFMGPIGAARVGYIDGQYILNPTNDQVKEGDLDLVVA
ATHDAVMMVESEAKELSEEVMLGAVVFAHDASKKIVEGIINLAEKAAKDPWELPVLDEGD
LKKQVKDLIGKGIAAAYKITAKADRVAAIAAAKAPMKEAFADADPATRLKAAKLGKKVEA
EIVRTAILKEGRRIDGRDTKTVRPIEAMVHFLPRTHGSALFTRGETQAICTTTLGTRDAE
QMIDGLTGLTYENFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPTKEEFP
YTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGTDFAVLSDIL
GDEDHLGDMDFKVAGTSEGITSLQMDIKIAGITEEIMKVALAQAKDGRAHILGEMAKALD
HTRTELSAHAPRIETITIDKSKIREVIGTGGKVIREIVATTGAKVDIDDEGVIKVSSSDQ
SQIEAAIKWIKGLVEEAEVGKIYDGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERVEKV
SDALSEGQEVKVKVLEIDPRGKVRLSMRVVDQETGAELEDTRPAREPRADRGPRRDGGGG
DRDRGPRRDGERGPRREGGERGPRRDGERGPRRDRSDDNGPAPDFAPAFLKRDDD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacatcaagaagagcgagatccaggtcggtggcaagaccatcaccttggaaacg
ggccgcgtcgcccgccaggccgatggcgccgtcctcgccaccatgggcgagacggtggtg
ctgtgcgccgtgaccgccgccaagagcgtgaaggaagggcaggatttcttcccgctcacc
gtccactatcaggaaaaatattcggcggccggccgtatccccggcggcttcttcaagcgt
gagcgcggcgcgaccgaaaaggagacgctgaccagccgtctcatcgatcgcccgatccgc
ccgctgttcccggaagggttctacaacgagatcctgtgcatcgcgcaggtgctgtcctac
gacggcgagaacgagcccgacattctggcgatgatcgccgcatcggccgcgctcaccatc
tcgggcgtgccgttcatgggcccgatcggcgccgcgcgcgtcggttatatcgatggccag
tatatcctgaacccgaccaacgatcaggtgaaggaaggcgacctcgacctcgtcgtcgcc
gccacgcatgacgcggtgatgatggtcgaatccgaagccaaggagctttcggaagaggtg
atgctgggcgccgtcgtgttcgcgcacgatgcgtcgaagaagatcgtcgagggcatcatc
aacctcgccgagaaggccgccaaggatccgtgggaactgccggttctcgacgagggcgac
cttaagaagcaggtcaaggacctgatcggcaagggcatcgccgccgcctacaagatcacc
gccaaggctgaccgcgtcgccgccatcgccgccgccaaggcgccgatgaaggaagccttc
gccgacgccgatccggcgacccgcctgaaggccgccaagctcggcaagaaggtcgaggcg
gagatcgtccgcaccgccatcctgaaggaaggccgccgcatcgacggccgcgacacgaag
accgttcgcccgatcgaggcgatggtccacttcctgccgcgtacccacggttcggcgctg
ttcacgcgcggcgagacgcaggcgatctgtaccacgacgctgggcacccgcgacgccgag
cagatgatcgacggcctgacgggcctgacctacgaaaacttcatgctgcactacaacttc
ccgccctattcggtcggtgaagtgggtcgcttcggcgcccccggtcgtcgggaagtcggc
cacggcaagctcgcctggcgcgcgctgcatccggtgctgccgaccaaggaggaattcccc
tacacgatccgcgtcctcagcgacatcacggagagcaacggctcctcgtcgatggcgacg
gtgtgcggcggttcgctgtcgatgatggatgccggcgtgccgctgaagcgcccggtttcg
ggcatcgcgatgggcctgatcctcgaaggcaccgacttcgccgtcctctcggacatcctg
ggcgacgaggatcacctcggcgacatggacttcaaggtggccggcacgtcggaaggcatc
accagcctgcagatggacatcaagatcgccggcatcaccgaggagatcatgaaggtcgcg
ctggcgcaggccaaggacggtcgcgcccacatcctgggcgagatggccaaggcgctggat
cacacccgcaccgagctgtcggcccacgcgccgcgcatcgagacgatcacgatcgacaag
tcgaagatccgcgaagtgatcggcacgggcggcaaggtgatccgcgagatcgtcgccacc
accggcgccaaggtcgacatcgacgacgagggcgtcatcaaggtgtcgtcgtccgatcag
tcgcagatcgaagccgcgatcaagtggatcaagggcctcgtcgaggaagccgaggtcggc
aagatctatgacggcaaggtcgtcaacctcgtcgatttcggcgcgttcgtgaacttcatg
ggcggcaaggacggtctcgtccacgtctcggagatcaagaacgagcgggtcgagaaggtg
tcggacgcgctgtccgagggccaggaagtcaaggtcaaggtgctcgagatcgatccgcgc
ggcaaggttcgcctgtcgatgcgcgtcgtcgatcaggagaccggcgccgagctggaggac
acccgcccggcccgtgagccgcgcgccgatcgcggcccgcgccgcgacggtggcggcggc
gatcgcgatcgcggcccgcgccgtgacggcgagcgtggcccccgccgtgaaggcggcgag
cgcggcccgcgccgcgacggcgagcgcggcccccgccgcgaccgttcggacgacaacggc
ccggcgcccgacttcgcgccggccttcctgaagcgcgacgacgactga
DBGET
integrated database retrieval system
