Sphingomonas naphthae: PQ455_02395
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Entry
PQ455_02395 CDS
T08850
Name
(GenBank) translocation/assembly module TamB domain-containing protein
Organism
snap
Sphingomonas naphthae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
WCT74101
LinkDB
All DBs
Position
480741..484889
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AA seq
1382 aa
AA seq
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MARRVVKWIGIGLAAIVLILGLALLAVDTGPGHRLITDRIAALRIPSGLQIRIGRIDGSI
WRRATLRDVRLYDTHGLFLEAPQIELDWRPWAWSDNRLQIERLTSDLVTVARVPALRSTG
QPMTLPGFDIHIGRLAVKTLRLGPAIAGKPTVASIDGRADLRDRRALIDLAVSSRLGDRA
QVHLDAAPDDDRFELTARIAAPQGGAIGAVGGLKRGLALAIDGKGGWTRWDGTARASLDG
RRMADIALGVRDGRATMRGSLSAEAFAPGKLRRLASPGIRIAGDATFADRRLQGGIRFDT
PELRLTAGGTLDFAEGAFRAFRIDAFLLQPRALFPNMTGRDIRLTTTLDGAFATAAFRYG
LIAPRVAFDNTGFDGVRAEGAGQFSPSPVKVPIRLTARRVTGVGDVAGGILANLRVQGVL
AVTAKTLTGDGLLFDSDKLKGKLGLSLDLVTGSYAVSVSGSIGHYLIPGLGLVDVKSDLK
VSPGPGGRGTIVAGKGYAWVRRLDNAFFRSLAGGLPRLVTDLRRTPDGVMHFSNLVLTAP
AIRIAGTGLRRVDGTFQFKGRGTQRQYGAFTLGLDGDIAKPKVDLLLDAPLDALGLAAVR
ATLDPIAEGFAYRAAGQSTLGAFTSDGRILMPPAAPTVIDIARLDVSGTTARGRLRSDPQ
GFTGELAVAGGGIDGTIAFAPAGGDQDTSQRITPRLAFQGATLAMDVPVRVRRGRVDLEV
VTDPAGASIEGRVLGIGVRRGTLGIGRAALTLQLKNGIGKISGRIAGSRGRAFVLNGAAD
LGADSVTLTGGGTIDRQPIQLSEPARLTRDGDGWRLATTRMTFAGGSAALSGRFGGGPVE
LAGNLDRMPLSVLDVAVPNLGLGGYATGRFAYASPGVGATPTGSANLTIRGLTRSGLVMS
SAPIDLGLVGKLDGAGLAGRAVAATGGKTVGRAQFRAAPLAGGATIADRLNAAPLFAQLR
YNGPADILWRLTGVETIDLTGPVAIGADVGGTLANPLIRGIVRSNAARLESAVSGTVVQK
ATIAGRFDGARLILDRVAGETSGGGTVAGTGSFGFSSERGFTMDMKLDAKAAQLLNRDDI
GATITGPLRLTLDPSGGTIAGDVTLDKSRFRLGRAVAAEIPRLKVNEINRPVSDMDEEAP
PAPWKLDLKARARNRLAVTGLGLDSEWRADLTIGGTIDNPAIGGRADLMRGGYEFAGRRF
DLDRGLIRFTGEAPPDPLLDIVAKANISGLSATIRVTGTGLKPLINFESVPALPEDELLS
RLLFGTSITNLSAPEALQLAAAVASLRDSGGGGLGLDPINAIRRATGLDRLRILPADVTT
GQGTSVAAGKYIGRRTYVELISDGAGYSATRVEFQITRWLSILSTVSTIGRQSANVRVSR
DY
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgggtggtgaagtggatcgggatcgggctggcggcgatcgtgctgatcctc
ggcctcgccctgctcgcggtcgataccggccccggccaccgcctcatcaccgatcgcatc
gcggcgctgcgcatcccctcggggctgcaaatccgcatcggccggatcgacggttcgatc
tggcgccgcgcgaccctgcgcgacgtgcggctgtacgacacgcacgggctcttcctggag
gcgccgcagatcgagctggactggcggccttgggcgtggagcgacaaccgcctccagatc
gagcggctgacctccgatctggtgaccgtcgcgcgcgtgccggcgctgcgctcgaccggc
cagccgatgaccctgccgggcttcgacatccatatcggccggctggcggtgaaaacgctg
cgcctcggcccggccatcgccggcaagcccacggtggcgtcgatcgacggccgcgccgac
ctgcgcgatcgccgcgcgctgatcgatctggcggtatcgagccggctgggcgatcgcgcg
caggtccatctcgacgccgcgcccgacgacgatagattcgagctgaccgcgcggatcgcg
gcgccgcagggcggggcgatcggcgcggtcggcggcctgaagcgcggcctcgccctcgcc
atcgacggcaaggggggctggacccgctgggacggcaccgcccgcgccagcctcgacggg
cggcggatggcggatatcgcgctcggcgtgcgcgacgggcgggcgacgatgcgcggcagc
ctctcggcggaggccttcgcgcccggcaagctgcgccgcctcgccagccccggcatccgc
atcgcgggcgatgcaaccttcgccgatcgccggctacagggcggcatccgcttcgacacg
cccgaattgcggctgacggcgggcggcacgctcgacttcgccgagggcgccttccgcgcc
ttccgcatcgacgccttcctcctccagccgcgcgccttgttccccaacatgaccggtcgc
gacatccgcctgaccaccacgctcgacggcgcctttgccaccgccgccttccgttacggg
ctgatcgcgccgcgcgtggcgttcgataacaccggcttcgatggcgtgcgcgccgagggg
gcggggcaattctcgccctcgccggtgaaagtgccgatccgcctcaccgcgcggcgggta
accggggtgggtgacgtggcgggcggcatcctcgccaatctgcgcgtgcagggcgtgctg
gcggtgacggccaagacgctcaccggcgacgggctgttgtttgattcggacaagttgaag
ggcaagctcggcctgtcgctcgatctcgtcaccggcagctatgcggtcagcgtctcgggc
agcatcggccattatctcatccccggcctcgggctggtcgatgtgaagagcgatctcaag
gtgtctcccggccccggcgggcgcggcacgatcgtggcgggcaagggctatgcctgggtt
cgccggctcgacaacgccttcttccgctcgctggcgggcgggctgccgcgcctcgtcacc
gatctgcgccgcacgcccgatggggtgatgcatttcagcaatctggtgctgaccgcaccc
gccatccgcatcgccggcacgggcctgcgccgggtggacggcacgttccagttcaagggg
cgggggacgcagcggcaatatggcgccttcacccttgggctggatggcgacatcgccaag
ccgaaggtcgatctgctgctcgatgcgccgctcgatgcgctggggctggcggcggtgcgc
gccacgctcgatccgatcgcggagggcttcgcctatcgcgcggccgggcaatcgacgctc
ggcgccttcacctcggacggccgcatcctgatgccgcccgccgcgcccacggtgatcgac
atcgcccggctcgacgtatcgggaacgaccgcgcgcgggcggctgcgttccgatccgcag
ggcttcacgggcgaactggcggtggccggcggcggcatcgacggcacgatcgccttcgcg
cccgccgggggcgatcaggataccagccagcgcatcacgccccgcctcgccttccagggg
gcgacccttgcgatggacgtgccggtgcgggtgcggcgcgggcgggtcgatctggaggtg
gtgaccgatccggccggcgcctcgatcgaaggccgtgtgctcggcatcggcgtacggcgc
ggaacgctcgggatcgggcgggcggcgttgacgctccagctcaagaacggcatcggcaag
atcagcgggcgcattgccggctcgcgcggccgcgccttcgtgctgaatggcgcggcggat
ctcggcgcggacagcgtgacccttaccggcggcggcacgatcgatcgccagccgatccag
ctgagcgagcccgcccgcctgacccgcgacggggacggctggcggctggccaccacgcgg
atgacctttgccggagggtcggccgcgctgtccgggcggttcggcggcgggccggtcgaa
ctcgccggcaatctcgatcggatgccgctgtcggtccttgacgtggcggtgcccaatctc
ggcctcggcggctacgccaccggccgcttcgcttatgcctcgccgggggtgggggcgacg
ccgacgggcagcgccaacctcacgatccggggcctgacccgatcggggctggtgatgtcc
tccgcgccgatcgatctcggcctcgtcggcaagctcgacggggcgggcctcgcggggcgg
gcggtggcggcgacgggcggcaagacggtcggccgcgcccagttccgcgcggcgccgctg
gccggtggcgccaccatcgccgatcgcctcaacgccgcgcccctgttcgcccagctgcgc
tacaacggcccggccgacatcctctggcggctgacgggcgtggagacgatcgacctgacc
ggcccggtcgcgatcggcgccgacgtgggcggcacgctcgccaacccgctgatccggggc
atcgtgcgctccaacgcggcaaggctggagagcgccgtctcgggcacggtcgtgcagaag
gccacgatcgccggccgcttcgatggcgcgcggctgatcctcgatcgggtcgcgggcgag
acgtcgggcggcggcaccgtcgccggcacgggcagcttcggcttctcctccgaacgcggc
ttcacgatggacatgaagctcgacgccaaggccgcgcaattgctcaaccgcgacgatatc
ggcgccacgatcaccggcccgctgcgcctgacgctcgatccctcgggcggcacgatcgcg
ggcgacgtgacgctcgacaagagccgcttccgcctcggccgcgccgtcgccgccgaaatc
ccgcgccttaaggtcaacgagatcaaccgccccgtcagcgacatggacgaggaggcgccg
cccgccccgtggaagctcgacctgaaggcccgcgcgcgcaaccggctggccgtaacgggg
ctcggcctcgacagcgagtggcgcgccgatctcaccatcggcggcacgatagacaatccc
gcgatcggcggccgggcggatctgatgcgcggcggatacgaattcgccgggcgccgcttc
gatctcgatcgcggcctgatccgcttcaccggagaggcgccgcccgatccgctgctggat
atcgtcgccaaggccaatatctcgggcctgtccgccacgatccgcgtcaccggcacaggc
ctgaaaccgctcatcaatttcgagagcgtccccgctttgcccgaggacgaactgctgtcg
cgcctgctgttcggcacctctatcaccaacctgtccgcgcccgaggcattgcagctggcg
gcggcggtggcctccctgcgcgacagcggcggcggcgggctggggctcgacccgatcaac
gcgatccgccgcgcgaccggcctcgatcgcctccgcatcctgccggccgacgtgacgacg
gggcagggcacatcggtggcggcgggcaaatatatcggccggcgcacctatgtggagctg
atcagcgacggcgcgggctattcggccacgcgggtcgagttccagatcacgcggtggctc
tcgatcctgtcgaccgtctccaccatcggtcgccagagcgccaacgtgcgggtatcacgc
gattattga
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