Sphingomonas naphthae: PQ455_02425
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Entry
PQ455_02425 CDS
T08850
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_02425
Enzymes [BR:
snap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PQ455_02425
DNA repair and recombination proteins [BR:
snap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PQ455_02425
Prokaryotic type
PQ455_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WCT74107
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All DBs
Position
490189..491559
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AA seq
456 aa
AA seq
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MTDPRLLWFRQDLRLADQAAVAAAASAGPVAAVYVLDDKVAGDWAIGGAQRWWLHHSLAA
LAKALDKHGVPLILRRGDAVAEVAKVAREVGAVEVHALHHYEPWWQAAEEALAEKVFLVL
HQGTRLIPPDQVRTGTGGRYRMFTAFWRALRQQMPPEAPRRAPTKIAGVSKPVASDRLAD
WDLLPTMPDWSKGFDVWTPGEAGAKRRLDRFVDHVEDYDEARNLPSIEGTSRFSPHLHFG
ELSPAQVWHRLDGKAGAEPFLRELAWRDFTGNVIDILPDYGKRNGRDAYGGFPWRRGQTA
DRDFAAWTRGRTGYPIVDAGMRQLWATGWMHNRVRMIAASFLIKHLLLDWRRGERWYWDT
LVDADYGNNAVNWQWVAGTGIDSNPFGRIMAPLSQSAKFDAGGYIRAWVPELAGLSDGVI
HDPHGAGCAPKEYPAPLIGHVEGRARALAANAKMRG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccgcgccttctctggttccgccaggaccttcgcctcgccgatcaggccgcc
gttgcggccgccgcctcggcggggccggtcgcggcggtctatgtgctggacgataaagtc
gcgggcgattgggcgatcggcggcgcgcaacgctggtggctgcaccatagcctcgcggca
ctcgccaaggcgctcgacaaacatggggtgccgctgatcctgcgccggggcgatgccgtc
gccgaggtggcgaaggtggccagggaggtcggcgcggtcgaggtccatgcgctccaccat
tacgaaccctggtggcaggcggccgaggaagcgctggccgagaaggtctttctcgtgctg
catcagggcacccgcctgatcccgcccgatcaggtgcggacgggcaccggcggccgctac
cgcatgttcaccgccttctggcgcgcgctacgccagcagatgccgcccgaggcgcctcgg
cgggcgccgacgaagatcgcgggggtctccaagcctgtcgccagcgaccggctggcggac
tgggatctgctgccgaccatgcccgattggtcgaagggcttcgacgtgtggacgcccggc
gaggcgggcgcgaaacggcggctcgatcgcttcgtcgatcatgtcgaggactatgacgag
gcgcgcaacctgccctcgatcgagggcacctcgcgcttctcgccccacctccatttcggc
gagctgtcgcccgcgcaggtgtggcaccggctcgacggcaaggcgggcgccgaacccttc
ctgcgcgaactggcgtggcgcgacttcaccggtaacgtcatcgatatcctgcccgattac
ggcaaacgcaacgggcgggacgcctatggcggtttcccgtggcggcgtgggcagactgcc
gatcgcgacttcgcggcgtggaccagggggcggacgggctatccgatcgtcgatgccggg
atgcgccaattgtgggcgaccggctggatgcacaaccgggtccgcatgatcgccgcttcc
ttcctcatcaagcatctcctgctcgactggcggcgcggcgaacgctggtattgggatacg
ctggtggatgccgattacgggaacaatgcggtcaactggcagtgggtcgcggggacgggg
atcgattccaatccgttcggccggatcatggcgccgctgtcgcaatcggcgaagttcgat
gcgggcggctatatccgggcgtgggtgccggagctggccgggttgagcgacggggtgatc
cacgatccgcatggggcggggtgcgcgccgaaggagtatccggcgccattgatcggccat
gtcgagggccgggcgcgggcgctggcggcgaacgcgaagatgcgcggctga
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