Sphingomonas naphthae: PQ455_03385
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Entry
PQ455_03385 CDS
T08850
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
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Sphingomonas naphthae
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Motif
Pfam:
TraG-D_C
TrwB_AAD_bind
AAA_30
RbsD_FucU
Motif
Other DBs
NCBI-ProteinID:
WCT74284
UniProt:
A0ABY7TM83
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Position
complement(717473..719056)
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AA seq
527 aa
AA seq
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MPMQSGSLDAPLLQLSPTDHFTLRDAVQGVVCMGGIGSGKTSASKALRQAYLRAGMGGMV
LCAKPEERDLWLREAAEAGRSDSVILVDGNTPIVNFLVYELRRQGANGLNAVLECLMQVL
DSSRAVSASPGKDGDAFWSDSKRQALRHTLPVLMAAKGTVSIPDIITFVRSAPRSPDEMT
DPGWQKTSFFCAMFAQAAARLDDATGRKMVSYWKDEWASLDPKTRGNIAISVSTALDRFN
HGWLQTAFCTESRVVPELAFGGAILILDMPALTRNEDGIVAQQLMKFLFQRAVLARNGLP
LVYQERPVFLWADEFQYFVNAYDAEFLSTCRGSKACMVILTQSLPTLYAKMGSDSARDRV
HHLLGNFATRIWHNQACHETNRWAADTIGQSLHRRANFSEGEGSSYSSGSNMGMGTNWGT
NSSSGSSSSYSTSGNGQSSYGGGSNSSRGSSEGGNDNVGRNRGESSSANVSRGYSEQMGY
LIEPAQFGRILKTGGPAHGNRVSAVWFQAGRRFNVSGGNAFVAEFRQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgcaatcgggcagcttggacgcaccgctgctgcaactctcaccgaccgaccat
ttcaccttgagggatgccgtgcagggcgtggtctgcatgggcggcatcggttcgggtaag
accagcgccagcaaggcgctgcggcaggcctatctgcgcgccggcatgggcggcatggtg
ctgtgcgccaagcctgaggagcgcgatctgtggttgcgcgaggccgccgaggcgggccgc
agcgactccgtgatcctcgtcgacggcaacacgccgatcgtcaatttcctcgtctacgaa
ttgcgccgccagggcgccaacggcctcaatgccgtgctcgaatgtctgatgcaggtgctc
gacagttcgcgggcggtgagcgcgtcgcccggcaaggatggcgatgcgttttggtctgac
agcaagcggcaggccctgcgccatacgctgccggtgctgatggccgccaagggtacggtc
agcatccccgacatcatcacgttcgtgcgcagcgccccgcgctcgccggacgagatgacc
gatcccggctggcagaagacgtccttcttctgcgccatgttcgcccaggccgccgcgcgg
ctcgacgacgcgactgggcgaaagatggtgtcctattggaaagacgaatgggcgtcgctt
gaccccaagacgcgcggcaacatcgcgatctcggtcagcacggcgctcgatcgcttcaac
catggctggctgcaaacggcgttctgcacggaaagccgggtggtccctgagcttgcgttc
ggcggcgccatcctcatcctcgacatgccggccttgacccgcaacgaggatgggatcgtc
gcccagcagctgatgaaattcctgttccagcgcgcggtgctggcccgcaacggcctgccg
ctggtctatcaggaacgcccggtgttcctgtgggctgatgagttccagtatttcgtgaac
gcctatgacgcggagttcctttcgacctgccgtggctcgaaggcctgcatggtcattctg
acgcaatcgctaccgaccctgtatgccaagatgggatctgattcagcccgcgaccgggtg
catcatctgctgggcaatttcgcgacccgcatctggcacaatcaggcgtgccacgagacc
aaccgctgggcggccgatacgatcggccagagcctccatcgccgcgccaacttctccgaa
ggcgaaggctccagctatagctcgggctcgaacatgggcatgggcaccaactggggcacg
aacagcagttcggggtccagttccagctacagcaccagcggcaacggccagtcctcttat
ggcggcggtagcaacagcagccgggggtcgagcgagggcggcaacgacaatgtcggccgc
aatcggggcgagagcagcagcgccaatgtcagccggggctattcggagcagatgggctac
ctcatcgagccggcccagttcggtcgcatcctcaagaccggcggcccagcccacggcaac
cgcgtctcggcggtctggtttcaggccgggcggcgcttcaacgtctcgggcggcaatgcc
ttcgtcgcggagttccggcaatga
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