Sphingomonas naphthae: PQ455_03570
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Entry
PQ455_03570 CDS
T08850
Name
(GenBank) L,D-transpeptidase family protein
Organism
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Sphingomonas naphthae
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WCT75383
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Position
761981..762928
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AA seq
315 aa
AA seq
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MGGATIAAQPQAASPEILSLQVQLDRLGFGPGVIDGKKGMSLAGALRGFQKANDLKVTGE
PDPATIDAIKAKGAVPGVIEVTLTAAMLAGPFHAIPKKEGDQAKLPALGYANAMEKLGEM
FHTTPAALIALNSPQTRVGVGAKIKVPNVLAAERNYDPELKPDWRQTLDMLNVSSAQPKA
AKIVVDKSDGVLMVYDEGDKLIAQFPATMGSGHDPLPIGSWKINGASYNPTFHYNPKLFW
DASSSDKKALLPPGPNGPVGVVWLDLSKEHYGIHGTPKPENIGRTESHGCIRLTNWDAAR
LAMMVKPGTPAIFQP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
attggcggtgcaacgatcgccgcgcaaccgcaggcggcgtcccccgaaatcctgtcgtta
caggtccagctcgatcgattgggattcgggccgggcgtgatcgacggcaagaaaggcatg
tcgctggcgggcgcgctgcgcgggttccagaaggccaacgacctgaaggtgacgggcgaa
cccgatcccgccacgatcgacgccatcaaggcgaaaggcgcggtgccgggcgtgatcgag
gtgacgttgacggcggcgatgttggccggcccgttccacgcgatccccaagaaggagggc
gatcaggccaagctgccggcgctgggctatgccaatgcgatggagaaactgggggagatg
ttccacaccacccccgccgcgctgatcgcgctcaacagcccgcagacgcgggtcggggtg
ggggccaagatcaaggtgcccaacgtgctggccgccgagcgcaattacgatcccgaactg
aagcccgactggcgccagacgctcgacatgctcaacgtctcctccgcccagccgaaggcg
gcgaagatcgtcgtcgacaagtccgatggcgtgctgatggtgtatgacgagggcgacaag
ctgatcgcgcaattcccggcgacgatgggatcgggccacgatccgctgccgatcggcagc
tggaagatcaacggcgcgtcctacaatcccaccttccactacaatcccaaattgttctgg
gatgccagctccagcgacaagaaggcgctgctgccgcccgggccgaacgggccggtcggt
gtggtgtggctcgatctgtcgaaggagcattatggcatccacggcacgcccaagccggag
aatatcggccgcaccgaaagccatggctgcatccgcctgaccaattgggatgcggcgcgg
ctggcgatgatggtgaagccgggcacgccggcgatcttccagccatga
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