Sphingomonas naphthae: PQ455_04270
Help
Entry
PQ455_04270 CDS
T08850
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_04270
Enzymes [BR:
snap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PQ455_04270
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PQ455_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WCT74454
LinkDB
All DBs
Position
904371..905921
Genome browser
AA seq
516 aa
AA seq
DB search
MTILIPILGDQLTHDLAALRDAPPSDAVVLMMEVADETTYVRHHKRKIALILSAMRHFAD
ELRGRGWTVDYIRLDDPDNSGSFTGEVARAVERHRPSAIRIVEPGEWRVKMMIGGWAKRF
GIPVDILVDDRFLCGILEFQTWAQARNDLVMEYFYREMRRKTGLLMTADGQPEGGQWNLD
KDNRAPPKHGLNYPEPMHFAPDETTRDVIALVAERFAGHFGRLEKFALPVTAGQARRALA
HFVRTALPDFGTYQDAMVTGQDWLYHSWLSPALNLGLLTPLEVAGAAARAYHAGDVPLNA
AEGFIRQIIGWREYVRGYYWMEMPDVAAANALGATRPLPEFYWTGETDMLCLAEAIRNTR
DHGYAHHIQRLMVLGNFAMLAGVRPQDVADWFLVVYADAYEWVELPNVIGMSQHADAGRL
ATKPYAGGGAYIDRMSDHCGRCRYDVKQKVGPDACPFNALYWDFLARHERRFRRNRRMVH
MYSNWDRMKPEVRDAYRANASAFLDTLEPAAVGWAK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcctcattcccatcctcggcgatcagctcacccacgatctcgcggctctccgc
gatgctccgccaagcgatgccgtcgtcctgatgatggaggtcgccgacgagacgacctac
gtccgccaccacaagcgcaagatcgcgctgatcctgtcggccatgcgccatttcgccgac
gagcttcgcggacggggatggacggtcgattacatccgcctcgacgatcccgataacagc
ggcagcttcaccggcgaagtggcgcgcgcggtcgaacgccaccgtccaagcgcgatccgc
atcgtcgagcccggcgagtggcgggtaaagatgatgatcggcggctgggcgaagcgcttc
ggcatccccgtcgatattctggtcgatgaccgcttcctgtgtggcatcctcgaattccag
acctgggcgcaggcgcgcaacgatctggtgatggaatatttctatcgcgagatgcgccgc
aagactggcctgctgatgaccgccgacggccagcccgaaggcgggcagtggaacctcgac
aaggacaatcgcgcgccgccgaaacacggtctcaactatcccgaaccgatgcacttcgcg
cccgacgagacgacgcgggacgtcatcgcgctggtggcggagcgtttcgccggtcacttc
ggacggctggagaagtttgccttgcccgtgaccgccgggcaggcgcgccgcgcgctcgcc
catttcgtgcggacggcgctgcccgatttcggcacctatcaggatgcgatggtgaccgga
caggactggctctaccacagctggctcagccccgcgctgaacctgggcctgctgaccccg
ctcgaggtcgccggggccgccgcccgcgcctatcatgcaggggatgtgccgctcaacgcg
gcggagggcttcatccgccagatcatcggctggcgcgaatatgttcgcggctattattgg
atggagatgccggatgtcgcggccgccaacgcgctcggcgcgacgcggccgctgcccgaa
ttctactggaccggcgagaccgacatgctgtgcctcgccgaagcgatccgcaacacccgc
gaccatggctatgcccaccatatccagcggctgatggtgctgggcaatttcgccatgctg
gcaggcgtccggccgcaggatgtcgccgactggttcctggtggtctacgccgatgcctat
gaatgggtggaactgcccaacgtgatcggcatgagccagcatgccgatgccggccgcctc
gccacaaagccctatgccggcggcggcgcctatatcgatcgcatgtcagaccattgcggc
cggtgccgctacgacgtgaagcagaaggtcggccccgatgcctgcccgttcaacgccctc
tactgggatttcctcgcccgtcacgaacgccgcttccgccgcaaccgccgcatggtgcac
atgtactcgaactgggatcgcatgaagccggaggttcgcgacgcctatcgcgcgaacgcg
tctgcgtttctcgatacgctcgaaccggcggccgtggggtgggcgaagtag
DBGET
integrated database retrieval system
