Sphingomonas naphthae: PQ455_05995
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Entry
PQ455_05995 CDS
T08850
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
snap
Sphingomonas naphthae
Pathway
snap03420
Nucleotide excision repair
snap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PQ455_05995
03430 Mismatch repair
PQ455_05995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_05995
Enzymes [BR:
snap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ455_05995
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQ455_05995
MMR (mismatch excision repair)
Other MMR factors
PQ455_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WCT74772
LinkDB
All DBs
Position
1273410..1275680
Genome browser
AA seq
756 aa
AA seq
DB search
MTDISPEAPYLRGLNAPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLVATRRAWPSE
ILAVTFTNKAAREMRHRIGRMLGDAVEGMPWLGTFHSIAAKMLRRHAELVGLQSNFTILD
TDDQLRLLKQLIVAADIDEKRWPARQLAGLIDRWKNRGWVPADIDAAESEAYANGRGGEL
YQRYQDRLKAVNACDFGDLLLHMLVILKTHRDVLESYQQRFRYILVDEYQDTNSSQYLWL
RLLAQTRKNICCVGDDDQSIYSWRGAEVANILRFERDFPGAAVIRLEQNYRSTGHILAAA
SGVIAQNGGRLGKTLWTEADSGEKVRVIGVWDGPEEARRVGDEIEAAQRRGTKLDDVAIL
VRAQFQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRVISQPADDLAFERIVNV
PKRGLGDKAVQKIHQLARAEGISLMLAAARILDSDELTGAARKSLGRLVADIAAWRDRLS
ALPHAELARQMLDESGYTAMLQADRSAESAGRLENLTELARAMEEYETLPAFLEHVSLVM
DNDADAQREQITIMTIHAAKGLEFDTVFLAGWEEGVFPSQRSLDEGGTASLEEERRLAYV
AITRARRLCFIFHAANRRIYGQWTSSIPSRFVGELPGEHIESETTMTGGASLWRAQWSEQ
ADPFADVGRGTGRGPGWQRAAVAGNLDRTTARVGESRVSAASFAAKPRGDISVGQRVFHS
KFGYGAVAEIEGNKLEIDFEQAGRKRVLDSFVSVAT
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacatttcccccgaagcgccctacctccgcgggctgaacgcaccccagcgcgag
gcggtgctgaccaccgaaggcccggttctggtgctggccggcgccggcaccggcaagacc
gccgcgctcaccgcccgcctcgcccatctggtggcgacgcggcgagcgtggccgagcgag
atcctggcggtcaccttcaccaacaaggccgcgcgcgagatgcgccaccgcatcggccgg
atgctgggcgatgcggtggaggggatgccgtggctcggcaccttccactcgatcgccgcc
aagatgctgcgccgccatgccgagctggtcgggctgcaatccaatttcaccatcctcgat
accgacgatcagctgcgcctgctgaaacagctgatcgtggcggccgacatcgacgagaaa
cgctggcccgcgcgccagctggcggggctgatcgatcgctggaagaatcgcggctgggtg
ccggccgatatcgatgcggccgagagcgaggcctatgccaacgggcgcggcggcgaactc
taccagcgctatcaggaccggctgaaggcggtgaacgcctgcgacttcggcgacctgctg
ctccacatgctcgtcatcctcaagacgcatcgcgacgtgctggaaagctatcagcaacgc
ttccgctacatcctcgtcgacgaatatcaggacacgaattcgagccagtatctctggctc
cgcctgctcgcccagacgcgcaagaacatctgctgcgtgggtgacgatgaccagtcgatc
tattcgtggcgcggcgccgaggtggccaacatcctgcgcttcgagcgggactttccgggc
gccgccgtgatccggctggagcagaattaccgatcgaccggccatattctcgccgccgcg
tctggcgtgatcgcgcaaaatggcgggcggctcggcaagacactgtggaccgaggccgac
agcggcgagaaggttcgcgtgatcggcgtgtgggacgggccggaggaagcccgccgcgtc
ggcgacgagatcgaggcggcgcagcggcgcggcacgaagctggacgacgtggcgatcctc
gtccgcgcccagttccagacgcgcgagttcgaggatcgcttcatcgcgatcggcatgccc
tatcgcatcgtcggcggcttccgcttctacgagcgcgccgagatccgcgacgccctggcc
tatctgcgcgtcatctcccagccggccgatgatctggcgttcgagcggatcgtgaacgtc
cccaagcgggggctgggcgacaaggcggtgcagaagatccaccagctcgcccgcgccgag
ggcatctcgctgatgctggccgccgcccgcatcctcgacagcgacgagctgaccggggcg
gcgcgcaagtcgctcggccggctggtggcggatatcgccgcgtggcgcgaccggctctcg
gcgctgccccatgccgagctggcacgccagatgctcgacgagagcggctataccgcgatg
ctccaggccgatcgctcggccgagagcgccgggcggctggagaatctcaccgaactggca
cgcgcgatggaggaatatgaaaccctccccgccttcctggaacatgtcagcctcgtcatg
gacaatgacgccgacgcccagcgcgagcagatcaccatcatgacgatccatgccgccaag
gggctggaattcgacacggtgtttctggccgggtgggaggaaggcgtattcccctcgcaa
cgctcgctcgacgagggcggcacagccagtctcgaggaagagcggcggctggcctatgtg
gcgatcacgcgggcgcggcggctgtgcttcatcttccacgccgccaaccgccgcatctac
ggccagtggacctcgtcgatcccctcgcgcttcgtcggcgagctgccgggcgagcatatc
gagagcgagacgacgatgaccgggggcgcatcgctctggcgcgcgcaatggtccgaacag
gccgatcccttcgccgatgtcgggcgcggcaccgggcggggccctggctggcagcgcgcg
gcggtggccggcaacctcgaccgcacgaccgcccgcgtcggcgaatcccgcgtctccgcc
gccagcttcgccgccaagccgcgcggcgacatatcggtcgggcaacgcgtgttccactcg
aagttcggctatggcgcggtggccgagatcgagggcaacaagctggagatcgatttcgag
caggccgggcgcaagcgggtgctggacagtttcgtgagcgtggcgacctga
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