Sphingomonas naphthae: PQ455_06200
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Entry
PQ455_06200 CDS
T08850
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
snap
Sphingomonas naphthae
Pathway
snap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQ455_06200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_06200
Enzymes [BR:
snap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PQ455_06200
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PQ455_06200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WCT74808
LinkDB
All DBs
Position
complement(1317183..1317875)
Genome browser
AA seq
230 aa
AA seq
DB search
MYSKSVLHSALHWWELAGVDTLVEEDVRDWFAPVRPREPVPAAEAAPAAPAPAALPTDLA
AFHEWWTSDTSLPGAPAQRVAPSGDAASGLMLLIDMPDSADAAAGALFSGEAGLLFDRML
AAIGRDRQSAYLASIWPARPAGGIADKAHAARLAEIALHHIALAAPRRLLLLGKGPVEAL
TGLDVVQARGRLHDIGGVPAVATHLPTPAWRAAAKAAAWADLLLLTEDFA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgtattcgaaatcggtgctgcacagcgccttgcattggtgggagctggccggcgtcgat
acgctggtggaggaggacgtgcgcgattggttcgcgccggttcgcccgcgcgagcccgtg
cccgccgccgaagccgcccccgcggcaccggcgccggccgccctaccgacggaccttgcc
gccttccatgaatggtggacgagcgacaccagcctgcccggtgccccggcccagcgggtc
gcgccatcgggtgatgcagcatccggcctgatgctgctgatcgacatgcccgacagcgcc
gatgccgccgccggcgcgctcttctcgggcgaggccgggctgctgttcgatcggatgctc
gccgcgatcggccgtgatcgccagtcggcctacctcgcctcgatctggccggcccgcccc
gccggcggcatcgccgacaaggcgcacgccgcacgcctcgccgagatcgcccttcaccat
atcgcgctcgccgcgccgcgccgtctgttgctgctgggcaagggcccggtcgaggcgctg
accgggctcgacgtggtgcaggcgcgcggccggctccacgatatcggcggcgtgcccgcc
gtcgccacccatctgcccacgcccgcctggcgcgccgccgccaaggccgccgcctgggcc
gacctcctgctgttgacggaagatttcgcatga
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