Sphingomonas naphthae: PQ455_06300
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Entry
PQ455_06300 CDS
T08850
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
snap
Sphingomonas naphthae
Pathway
snap00521
Streptomycin biosynthesis
snap00523
Polyketide sugar unit biosynthesis
snap00525
Acarbose and validamycin biosynthesis
snap00541
Biosynthesis of various nucleotide sugars
snap01055
Biosynthesis of vancomycin group antibiotics
snap01100
Metabolic pathways
snap01110
Biosynthesis of secondary metabolites
snap01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PQ455_06300 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PQ455_06300 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PQ455_06300 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PQ455_06300 (rfbB)
00525 Acarbose and validamycin biosynthesis
PQ455_06300 (rfbB)
Enzymes [BR:
snap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PQ455_06300 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
WCT74827
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Position
complement(1336980..1338038)
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AA seq
352 aa
AA seq
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MKIMVTGGAGFIGSALILHLIDESDHHILNFDALTYAGVAASLAPVAAHPRYRFVRGDVC
DARAVAGAIAGFQPDVIAHLAAESHVDRSIDGPAAFVQTNLIGTFTMLEQALAYWQGLDA
PRRAAFRFHHISTDEVFGSLGDSGAFTEDSAYDPRSPYSATKAGADHLVRAWGHTYGLPV
LLTNCSNNYGPRQFPEKLIPLTILRAIGGDTLPVYGDGRQVRDWLHVEDHARALRRVFEA
GVPGETYNVGGGAERFNIDVVQTICAALDEQQPLGHDFSYAAQIRHVADRPGHDRRYAID
ASRIRAELGWAPRETFAGGISRTVAWYLAHPHWWAPLVDRGDATERRGVLSA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatcatggtgacaggaggcgcgggattcatcggatcggcgctgatcctccacctg
atcgacgagagcgatcaccacatcctcaacttcgacgcgctgacctacgccggcgtcgcg
gcctcgctcgcgccggtcgcggcgcatccgcgctatcgcttcgtccggggcgacgtgtgc
gatgcccgggcggtggcgggcgccatcgccggtttccagcccgacgtgatcgcccacctc
gccgccgagagccatgtcgatcgttcgatcgacggcccggccgccttcgtccagaccaac
ctgatcggcaccttcacgatgctggaacaggcgctggcctattggcagggcctcgacgcg
ccacgccgtgccgccttccgcttccaccacatctccaccgacgaggtttttggttcgctc
ggcgacagtggcgccttcaccgaggacagcgcctacgatccgcgctcgccttattccgcc
accaaggcgggcgccgaccatctcgtccgcgcctggggccatacctacggcctgccggtg
ctgctcaccaattgctcgaacaattacggccctcgccaattccccgagaaactgatcccg
ctcaccatcctgcgcgccatcggcggggatacgctgccggtctatggcgatggccggcag
gtgcgcgattggctgcatgtcgaggatcatgcccgcgcgctgcgccgggtgttcgaggcg
ggcgtgccgggtgagacctacaatgtcggcggcggtgccgagcggttcaatatcgacgtg
gtccagacgatctgcgccgcgctcgacgagcagcaacctcttggccacgacttcagctat
gccgcgcagatccgccacgtcgccgacaggccgggccacgaccgccgctacgcgatcgac
gccagccggatccgcgccgaactcggctgggcaccgcgggagacgttcgccggcggcatc
tcgcgcacggtcgcctggtatcttgcccatccgcattggtgggcgccgctcgtcgaccgg
ggggacgcaaccgaacgccggggcgtcctgtccgcatga
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