Sphingomonas naphthae: PQ455_08265
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Entry
PQ455_08265 CDS
T08850
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
snap
Sphingomonas naphthae
Pathway
snap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQ455_08265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snap02000
]
PQ455_08265
Transporters [BR:
snap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PQ455_08265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
WCT75199
LinkDB
All DBs
Position
1740581..1743139
Genome browser
AA seq
852 aa
AA seq
DB search
MRRGHRRLPHAAVEFLLLFALWAIPTAACARDTIRVALQLEPPSLDPTSGAANATDEVVY
ATIFEGLVRAAADGSIQPLLAAGWTVSPDARHYEFGLRPNVRFQDGRPLTASDVVFSLDR
ARAAGSSNAQATAFGNIASIRALDSLRVAIDLTAPDAGFLTLLSFADAVIVSPASASTLA
TRPIGTGPYRLTGWRRGDRIMLARNPLYWGTAARTDRVAFRFIADPSAAYAAMRAGDIDI
FPDFPAPETLPRLAADPALRLAIGNSQGKVILALNQRDGPLAKLAVRRAIARAIDRRAII
DGAMYGYGTPIGSHFSTQSPDYVDLTGRYPFDPAAARRLLAQAGSPRGFALTLKLPPPTY
ARRTGEILAAQLRRIGIRVTIRSVEWAAWLDEVFQRHDFDMTIVNHAEPFDYDIYGRPDY
YFGYDSPAYRALLNRLRGTIDPAARHAMLGAIQRRLADDAVNGFLFQFPHLGVQARALDG
VWANTPNQSLDLAAAHFAGAGGPDATSSTAPRGRGWAKPALIAAVAGLLLLALLAFGPRH
LAGRLLVLAGTLLAASLGVFLLIQIMPGDPAAFMMGLNASPQAIAALHTELGLGGPPVTR
YLAWVAGLAQGDFGISYTYRVPVAGLLWDRLSLSLPLALLATGLSVVLGVGAGYLAVSRR
SALLDHGFSWLGRIGVALPNYWLAILLVLAFAIGLGWADAGGFPGWSAGPIPVIRALALP
VVALALPQAAILMRVTRASLLEAIDQDYVRTARAKGLRRAAAIRRHALPNALGPVLTVLG
LQIPFLIAGSAIVENVFFLPGLGRLVIQAITQRDLIVVQSVVMLLVALTILSSFVIDMAQ
GLIDPRIRDAVS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtcgaggacatcggcggcttccacatgcggccgttgaatttcttctgctgttcgcg
ctttgggcgatcccgacggcggcctgcgcgcgtgacaccatccgcgtcgcgctccagctc
gagccgccgtcgctcgaccccaccagcggcgcggccaacgccaccgacgaggtggtctat
gccaccatcttcgagggattggtccgcgccgccgccgacggctcgatccagcctttgctg
gcggcaggctggacggtctcgcccgatgcgcgccactatgaatttggcctgcgcccgaac
gtccgctttcaggatggccgccccctcaccgcttccgacgtcgtcttcagcctcgatcgc
gcccgcgcggcgggatcgagcaacgcccaggccaccgccttcggcaacatcgcgtcgatc
cgcgcgctcgattccttgcgcgtcgcgatcgatctaaccgcgcccgatgccggcttcctc
acactcctcagcttcgccgacgcggtcattgtgtcgccggcctccgcctcgaccctcgcg
accaggccgatcggcaccgggccctaccggctcaccggctggcggcgcggtgacaggatc
atgctcgcgcgcaatccgctctattggggcaccgccgcgcgcaccgaccgcgtcgccttc
cgcttcatcgccgatcccagcgccgcctacgccgcgatgcgcgcgggcgatatcgacatc
ttccccgattttcccgcgcccgaaaccctcccccgcctcgccgccgatcccgcgctccgg
ctcgcgatcggcaacagccagggaaaggtgatcctcgccctcaaccagcgcgacggcccg
ctcgccaagctggcggtgcgccgcgcgatagcccgggcgatcgaccgccgcgcgatcatc
gacggcgcgatgtacggctacggcaccccgatcggcagccatttctccacccagagcccc
gattatgtcgacctcaccggtcgttatccgttcgatcccgccgccgcgcggcggctgctc
gcgcaggccggttccccgcgcggtttcgcgctcacgctgaaattgccgccccccacctac
gcccgccgcaccggcgagatactggcggcgcaactccgccggatcggcatccgcgtcacg
atccgctcggtcgaatgggcggcgtggctcgacgaggtgttccagcggcacgatttcgac
atgacgatcgtcaaccatgccgagccgttcgattacgacatctacggccgccccgattac
tacttcggctatgacagcccggcctatcgcgccctgctgaaccggctgcgcggcacgatc
gacccggccgcgcgccatgcgatgctcggcgcgatccagcgcaggctggcggacgatgcg
gtcaacggcttcctgttccagttcccgcatctcggcgtgcaggcgcgcgcgctcgacggc
gtatgggccaacacgccgaaccagtcgctcgacctggccgccgcccatttcgccggcgcc
ggcgggccggacgccacgtcctcgacggcgccgcgcgggcggggctgggcgaaacccgcc
ctgatcgcggcggtggcgggcctgctgctgctcgccctgctggcgttcggcccccgtcat
ctggccggccgcctgctcgtcctggccggcacccttctcgcggcgagcctcggcgtgttc
ctgctgatccagatcatgccgggcgatccggccgccttcatgatgggcctaaacgccagc
ccgcaggcgatcgccgccctccataccgagctcggcctcggcggcccaccggtcacccgc
tatctcgcgtgggtcgcggggctggcgcagggcgatttcgggatcagctacacctatcgc
gtcccggtcgccggcctgttgtgggatcggctctccctctcgctcccgctcgcgttgctg
gcgacgggcctgtcggtcgttctgggcgtcggcgcgggctatctcgccgtcagtcgccgc
agcgccctgctcgatcacggcttttcctggctcggccggatcggcgtggcgctgcccaat
tactggctggcgatcctgctggtgctggccttcgccatcggcctcggctgggccgacgcc
ggcggctttccgggctggtcggccgggccgatccccgtgatccgcgccctcgccctgccc
gtcgtcgcgctggcgctgccgcaggcggcgatcctgatgcgcgtcacccgcgccagcctg
ctggaggcgatcgatcaggattatgtccgcaccgcccgcgccaagggactgcgccgcgcc
gccgccatccgccgccacgccctgcccaacgcgctcggcccggtgctgacggtcctcggc
ctccagattcccttcctgatcgccggcagcgccatcgtcgagaatgtcttcttcctgccg
gggctcggccgcctcgtcatccaggccatcacccagcgcgacctgatcgtggtgcaatcg
gtggtgatgctgctcgtcgcgctcactatcctgtcgagcttcgtcatcgatatggcgcag
ggcctgatcgatccgcgcatccgcgacgcggtgtcgtga
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