Sphingomonas naphthae: PQ455_08295
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Entry
PQ455_08295 CDS
T08850
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
snap
Sphingomonas naphthae
Pathway
snap00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PQ455_08295 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snap01007
]
PQ455_08295 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snap03016
]
PQ455_08295 (aspS)
03029 Mitochondrial biogenesis [BR:
snap03029
]
PQ455_08295 (aspS)
Enzymes [BR:
snap01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PQ455_08295 (aspS)
Amino acid related enzymes [BR:
snap01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PQ455_08295 (aspS)
Transfer RNA biogenesis [BR:
snap03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PQ455_08295 (aspS)
Prokaryotic type
Other AARSs
PQ455_08295 (aspS)
Mitochondrial biogenesis [BR:
snap03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PQ455_08295 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
WCT75205
LinkDB
All DBs
Position
complement(1748389..1750167)
Genome browser
AA seq
592 aa
AA seq
DB search
MHAYRTHTCAALRQTDVGETVRLSGWVHRKRDHGGLLFVDLRDHFGLTQIVTNIGSEAHS
ALESMRVESVVTVTGDVVARAAEAVNPNLATGAIEVRAVTVEVQSAAQELPMPVAGEAEY
PEDIRLRYRFLDLRRERIHKNIMLRSGVIASIRKRMVDQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSFVTQDDVFAAIEPVLHGVFEEFAAGRTVTPAPFPRIAYRDSMLRYGSDKPDLRNPIEI
VDVTDHFHGSGFGLFARLVEGGSVVRAIPAPGAGAKSRKFFDDMNEWARGQGYSGLGYIN
IKDGVPAGPIAKNHGEEATAKLIEALGLGPDDGVFFAAGKPGDAAKLAGLARTRTGEELG
LIEQGVFKFCWIVDFPMYEYDEESKKVDFSHNPFSMPQGGLEALATMDPLDILAYQYDIV
CNGIELSSGAIRNHRPDIMYKAFEIAGYSQADVDTNFAGMINAFKCGAPPHGGSAPGIDR
IVMILADEPNIREVVLFPMTQKAEDLMMGAPAPATPKQLRELSIRVVDGPKG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcacccacacctgcgccgcgctccgccagaccgacgtgggcgagacc
gtccgcctctccggctgggtccaccgcaagcgcgatcatggcgggctgctgttcgtcgat
ctgcgcgaccatttcggcctgacccagatcgtcaccaacatcggatcggaggcgcatagc
gcgctggaatcgatgcgggtcgaatccgtcgtcaccgtgaccggcgatgtcgtggcgcgc
gccgccgaggcggtgaaccccaacctcgccaccggcgcgatcgaggtgcgggccgtgacc
gtcgaggtccagtcggccgcgcaggagctgccgatgccggtggcgggcgaggccgaatat
cccgaggatatccgcctgcgctaccgcttcctcgatctgcggcgcgagcggatccacaag
aatatcatgctgcgctcgggcgtgatcgcctcgatccgcaagcggatggtcgatcagggc
ttcaccgaattccagaccccgatcctgaccgcctccagccccgaaggcgcgcgcgactat
ctggtgcccagccgcgtccaccccggcaaattctacgcgctgccgcaggcgccgcagatg
ttcaagcagctgctgatggtggcgggtttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaggatgcccgcgccgatcgctcgcccggcgaattctatcagctcgatttcgag
atgagcttcgtcacgcaggacgatgtgttcgccgcgatcgagccggtgctgcacggcgtg
ttcgaggaattcgccgccggccgcaccgtcacccccgcgccgttcccgcgcatcgcctat
cgcgattcgatgctgcgctatgggtcggacaagcccgatctgcgcaatccgatcgagatc
gtcgatgtcaccgatcatttccatgggtcgggcttcggcctgttcgcccggctggtcgag
ggcggcagcgtcgtccgcgccatcccggcgccgggggcgggggcgaagagccgcaaattc
ttcgacgacatgaacgaatgggcgcgtggccagggctattcgggcctcggctacatcaac
atcaaggatggcgtgcccgccggcccgatcgccaagaaccatggcgaggaagcgaccgcg
aaactgatcgaggcgctcggcctcggccccgacgacggcgtgttcttcgccgccggcaag
ccgggcgacgccgccaagctcgccggcctcgcccgcacgcgcaccggcgaggagctgggg
ctgatcgagcagggcgtgttcaaattctgctggatcgtcgatttcccgatgtacgagtat
gacgaggaatcgaagaaggtcgatttcagccacaatcccttctcgatgccgcagggcggg
ctcgaggcgctggccacgatggatccgctcgatatcctggcctatcaatatgatatcgtc
tgcaacggcatcgaactctcaagtggtgcgatccgcaaccatcggccggatatcatgtac
aaggcgttcgagatcgccggctattcgcaggccgacgtcgacacgaacttcgcgggcatg
atcaacgccttcaagtgcggcgcgccgccgcatggcggctcggcgccgggcatcgatcgc
atcgtgatgatcctggccgacgaacccaatatccgcgaggtcgtcctcttcccgatgacg
cagaaggccgaggatctgatgatgggcgcgccggctccggcgacgcccaagcagctgcgc
gaactctcgatccgcgtggtggatggacccaagggctga
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