Sphingomonas naphthae: PQ455_08315
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Entry
PQ455_08315 CDS
T08850
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
snap
Sphingomonas naphthae
Pathway
snap00190
Oxidative phosphorylation
snap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PQ455_08315
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ455_08315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snap03019
]
PQ455_08315
Enzymes [BR:
snap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
PQ455_08315
Messenger RNA biogenesis [BR:
snap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PQ455_08315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
ABC_transp_aux
Motif
Other DBs
NCBI-ProteinID:
WCT75209
UniProt:
A0ABY7TSK0
LinkDB
All DBs
Position
complement(1753434..1755608)
Genome browser
AA seq
724 aa
AA seq
DB search
MEQPVPANDALDDALVGDSHPEPIAPRHRYFNRELSWLAFNERVLEEACNPSHPLLERLR
FLSISGNNLDEFFMVRVAGLAGQRTREIEDRSPDGLTPSQQLAAIAREADRLMADQQAVW
HDLQRELETAGIRILGRDQIDADSAAFLERYFREQVFPVLTPQALDPAHPFPFIPNKGFS
IIFELRRISDGTIIRELLMVPATLRRFVRVPGKEARYVAIETLIRHFRGILFPGYDLVGY
GGFRVIRDSDIEIEEEAEDLVRYFRSAIKRRRKGRVIRLETHERLPDQLEAMVRAELGGT
DAFVNETEGFLGIVDLAELVDEDRPDLKFSAMTPRFPERIREHGGDCFAAIKAKDLIVHH
PYETFDVVLAFLKQAAQDPDVVAIKQTLYRAGKQSAVIRALIDAAEAGKSVTAVVELKAR
FDEEQNLDWAAMLERAGVQVVYGFIDWKTHAKVSMVVRREGDGYRTYCHFGTGNYHPITA
RIYTDLSYFTADPVVGSDAAQLFNYITGYVEPQHLQRLTISPHGLRDKIGALIDAEIDHA
RAGRPAAIWAKVNSLVDPALIEKLYRASAAGVKIDLVVRGICCLRPGVDGLSDNIRVKSI
IGRFLEHSRIMCFGNGHGLPSAKAKVYISSADWMPRNFDRRVEYLLPIDNPTVHAQVLNQ
VMVANLNDDEQSWWLGPDGSYTRVVPGKRPFNLHRYFMTNPSFSGRGAAAERAGGVPVLT
LREV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcccgtacccgccaacgacgcgctcgacgatgcgctggtgggcgatagccat
cccgagccgatcgccccccgccaccgttatttcaaccgcgagctttcctggctcgccttc
aacgagcgggtgctggaagaggcgtgcaatccctcgcaccccttgctggagcggctgcgc
ttcctttcgatctcgggcaacaatctcgatgaattcttcatggtccgcgtggcggggctg
gcgggccagcgcacccgtgagatcgaggatcgctcgcccgacggcctgacccccagccag
cagctcgccgcgatcgcgcgcgaggccgatcggctgatggccgatcagcaggcggtgtgg
cacgatctgcaacgcgagctggagaccgccggcatccgcatcctcggccgtgaccagatc
gatgccgattcggccgccttcctcgaacgctatttccgcgagcaggtgtttccggtcctg
acaccgcaggcgctcgatccggcgcatccctttccgttcatcccgaacaagggcttctcg
atcatcttcgaactgcgccgcatttcggacgggacgatcatccgcgaactgctgatggtg
cccgccaccctccgccgcttcgtgagagtgcccggcaaggaagcgcgctatgtggcgata
gagacgctgatccgccatttccggggcatcctgttccccggctacgatctggtcggctac
ggcggtttccgcgtgatccgcgacagcgatatcgagatcgaggaagaggccgaggatctc
gtccgctacttccgctcggccatcaagcggcgccgcaaggggcgggtgatccgcctcgag
acgcacgagcgcctacccgaccagctcgaggcgatggtccgcgccgaactgggcggcacc
gatgccttcgtcaacgagaccgagggcttcctcggcatcgtcgatctggccgaactggtc
gacgaggatcggcccgacctgaaattttcagccatgacgccgcgtttccccgagcgaatt
cgggaacatggcggcgattgcttcgcggcgatcaaagccaaggatctgatcgtccaccac
ccgtatgagacgttcgatgtggtcctcgccttcctcaagcaggcggcgcaggacccggat
gtcgtggcgatcaagcagacgctgtatcgcgccggcaagcaatcggcggtgatccgcgcg
ctgatcgacgcggccgaggccggcaagtcggtgaccgccgtggtcgagctgaaggcgcgg
ttcgacgaggagcagaatctcgactgggcggcgatgctggagcgcgccggcgtgcaggtc
gtctacggcttcatcgactggaagacccacgcaaaggtttcgatggtcgtccgtcgcgag
ggcgacggctatcgcacctactgccatttcggcacgggcaattaccatccgatcacggcg
cgaatctacaccgatctcagctacttcacggccgatcctgtcgtgggatcggatgccgcg
caactgttcaactacatcaccggctatgtcgagccgcagcatctccagcggctcaccatc
tcgccgcacggcctgcgcgacaagatcggcgcgctgatcgatgccgagatcgaccatgcc
cgcgccggccgccccgccgccatctgggccaaggtcaattcgctggtcgatccggcgctg
atcgagaagctctatcgggcgagcgcggcgggcgtgaagatcgatctcgtcgtgcgcggc
atctgttgcctgcgccccggcgtcgatggcctgtcggacaatatccgggtcaagtcaatc
atcggccgctttctggaacacagccggatcatgtgcttcggcaacggccatggcctgccc
agcgccaaggccaaggtctatatttcctcggcggactggatgccccggaacttcgatcgc
cgggtggagtatcttctcccgatcgacaatcccacggtccatgcgcaggtgctcaaccag
gtgatggtcgccaatctcaacgacgacgagcagagctggtggctcggccccgacggcagc
tacacccgcgtcgtgcccggcaagcggccgttcaacctgcaccgctatttcatgaccaac
ccgtccttctccggtcgcggcgccgccgccgagcgggcgggcggggtgcccgtcctcacc
ttgagggaggtctga
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