Sphingomonas naphthae: PQ455_08885
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Entry
PQ455_08885 CDS
T08850
Name
(GenBank) porin
KO
K06076
long-chain fatty acid transport protein
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snap02000
]
PQ455_08885
Transporters [BR:
snap02000
]
Other transporters
Pores ion channels [TC:
1
]
PQ455_08885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
Porin_4
OMP_b-brl
Porin_2
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
WCT75314
LinkDB
All DBs
Position
complement(1884656..1885957)
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AA seq
433 aa
AA seq
DB search
MSKVTLRACLVAGVSVIAGSIGSAAHAGAFYLQEQSTKGAGRAFSGEVADKGPESLWWNP
AAIGGMTGGAAYVGASAILPKGDVDNINTRIIRPGQAPAAVGGQQSSADPINKGVVPSGA
IAYGLTPQIAVGLAVTAPYNFTTNYDSDSWARYTADKSHLRTIDIQPSVAFTPTPGVSIG
AALNIEQTKASLSNFLPNLSPLLADGHQTLKGDGWDLGWSAGAQFSNGPFTLGASYKSSI
KHKLGGTVTTAGLLGPLAAQNRVIDTDATFRTPWQATVGARVAVTPAVTLNAQVVRVGWG
KFDAIRLGAPLNTAIPENYRNTWSFAGGVDYMVSPQWTLRAGVQHDQTPTRDGERDARVP
DADRWNFAGGASYQMSKAIAIDAAVNYIHFKDATIDRTTAAYAGTAVQTPILVSGQLRSA
SAVVLSLGARASF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgacgcttcgggcctgtctggtagccggtgtttcggtgatcgcggggtcg
atcggctcggccgcccatgccggcgccttctatcttcaggaacagtccaccaagggcgcg
ggccgcgccttttcaggcgaagtggccgacaagggcccggaatcgctgtggtggaacccg
gccgcgatcggcgggatgaccgggggcgccgcgtatgtcggcgcgagcgcgatcctgccc
aagggtgacgtggacaatatcaacacccgcatcatccgccccggccaggcgccggcggcc
gtcggcggccagcaaagctcggccgatccgatcaacaagggcgtcgtcccctcgggcgcg
atcgcttatggcctgacgccgcagatcgcggtcggcctggccgtcaccgcgccctacaat
ttcaccaccaattacgattcggacagctgggcgcgctacaccgccgacaagagccacctg
cgcacgatcgacatccagccctcggtcgccttcacgccgacgccgggcgtcagcatcggc
gccgcgctcaatatagagcagaccaaggcgagcctctccaacttcctgccgaacctctcg
ccgctgctggccgatggccaccagacgctgaagggcgacggctgggatctcggctggtcg
gccggcgcgcaattctccaacgggccgttcacgctcggcgccagctacaagtccagcatc
aagcacaagctgggcggcacggtgacgaccgccggcctgctcggcccgctcgccgcccag
aaccgggtgatcgacaccgacgccactttccgcacgccgtggcaggcgacggtcggcgcg
cgggtcgccgtcactccggcggtgacgctgaacgcgcaggtcgtgcgtgtcggctggggc
aagttcgatgcgatccgcctcggcgcgccgctcaacaccgccattcccgagaattaccgc
aacacctggagcttcgccggcggcgtcgattacatggtctcgccgcaatggaccctgcgc
gctggcgtccagcacgaccagaccccgacccgcgacggcgagcgcgacgcccgcgtgccg
gatgccgatcgctggaacttcgccggcggcgccagctatcagatgagcaaggcgatcgcg
atcgacgcggcggtcaattacatccacttcaaggatgctacgatcgaccgcacgacggcg
gcctatgccggcaccgccgtgcagacgccgatcctggtgagcggccagctgcgcagcgcc
agcgccgtggtgctctcgctcggcgcccgcgcgagcttctga
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