Sphingomonas naphthae: PQ455_09975
Help
Entry
PQ455_09975 CDS
T08850
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snap03009
]
PQ455_09975
Enzymes [BR:
snap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PQ455_09975
Ribosome biogenesis [BR:
snap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PQ455_09975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
WCT71978
UniProt:
A0ABY7TGL1
LinkDB
All DBs
Position
complement(2126361..2127557)
Genome browser
AA seq
398 aa
AA seq
DB search
MTAELIVRIASRGDGITADGRKSPQAAPGDWLELDGSVTPGPHHVDPPCRHFPTCGGCQL
MHVDDESYGGFAVDKIVGALRQQGIEPPEMAPIHLSPPRTRRRAALSIERKGRVVRVGFH
EEASHRIVDMAECHILAPELFALVAPLRQLMARLLPDRGTATAQMTLTDSGVDLALEGMA
APGLEQSEALTMFAEGHGLARLSIDEGFGPETRWEPDAVTVTLGGVKVPLSAGAFLQATA
DGEAALVAAVIDAIGDAPTIADLFAGLGTFTLPLAARAKVYAAEGARDPMLALKGAAMQA
GRAVFPEHRDLFRRPLSTSELDRFAAIVLDPPRAGAREQVATLAASTASRLAYVSCNPAT
FARDARALIAGGWRLDWIRPVGQFRWSTHVELASRFSR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagaattgatcgtccgcatcgcctcgcgtggcgatggcatcaccgccgatggg
cgcaagtcgccgcaggcggcgccgggcgactggctggagctggacggcagcgtcacgccg
gggccgcaccatgtcgatccgccgtgccgccatttcccgacatgcggcggctgccagctg
atgcatgtcgacgacgaatcctatggcgggttcgcggtcgacaagatcgtcggcgcgctg
cgccagcaggggatcgagccgcccgagatggcgccgatccacctctcgccaccgcgcacc
cgccgtcgcgccgcgctgtcgatcgagcgcaaggggcgggtggtgcgcgtcggcttccac
gaggaggcgagccaccggatcgtcgatatggccgaatgtcacatcctcgcgcccgaactg
ttcgctttggtcgcgccgctgcgccagctgatggcgcgcctgctgcccgatcgcggcacc
gcgacggcgcagatgacgctcaccgacagcggcgtcgatctcgcgctcgaggggatggcg
gcgcccggcctcgaacagagcgaggcgctgaccatgtttgcggaagggcatggcctcgcc
cgcctgtcgatcgacgaagggttcggccccgagacccgctgggagcccgatgcggtgacc
gtcacgctcggcggggtgaaggtgccgctctccgccggcgccttcctccaggcgaccgcc
gatggcgaggcggcgctggtcgcggcggtgatcgacgcgatcggcgacgcgcccaccatc
gccgacctgttcgccgggctcggcaccttcactttgccgctggcggcgcgggcgaaggtc
tatgcggcggagggtgcgcgcgatccaatgctggcgttgaagggcgccgccatgcaggcc
ggccgcgcggtctttcccgaacatcgcgacctcttccgtcgcccgctctcgacatccgag
ctggaccgcttcgccgccatcgtcctcgatccgccacgcgccggcgccagggaacaggtc
gcaacgctcgccgcgtcgacggcgtcgcgcctggcctatgtctcctgcaaccccgccacc
ttcgcccgcgacgcacgggcactgatcgcgggcggctggcggctggactggatacggccg
gtgggccagttccgctggtccacgcacgtcgagctggcgagccgtttcagtaggtaa
DBGET
integrated database retrieval system
