Sphingomonas naphthae: PQ455_13550
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Entry
PQ455_13550 CDS
T08850
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
snap
Sphingomonas naphthae
Pathway
snap03030
DNA replication
snap03430
Mismatch repair
snap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ455_13550
03430 Mismatch repair
PQ455_13550
03440 Homologous recombination
PQ455_13550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snap03032
]
PQ455_13550
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_13550
Enzymes [BR:
snap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ455_13550
DNA replication proteins [BR:
snap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ455_13550
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ455_13550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF1882
Motif
Other DBs
NCBI-ProteinID:
WCT72652
UniProt:
A0ABY7THD9
LinkDB
All DBs
Position
complement(2818254..2818757)
Genome browser
AA seq
167 aa
AA seq
DB search
MTQQQDAVPDFVVIDVETACSRVSSICQVGIVGFRSGSEVFAYETLVDPCDEFSSFNTRI
HGISSDHVAGMPSFGHIHSIIDGHLAGRITVAHSFFDKGALSAACRIHERTDIKTTWLDS
VRVAKRAWPDLPSHRLNVLSRFLGIRHKHHDALSDARARRHGDRTGH
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcaacaggacgcagtgcccgacttcgtcgtcatcgacgtcgagacagcctgc
tcgcgcgtcagtagcatctgtcaggtcggcatcgtcgggttccgatcgggcagcgaggtt
ttcgcctacgagaccctcgtcgacccatgtgacgagttctcctcgttcaacacccgcatt
cacgggatcagctcggaccatgtcgccggcatgccgagcttcggccacatccattcgata
atcgacgggcacctcgccggtcgcatcaccgtggcgcactccttcttcgacaagggagcg
ctctcggcggcctgccggatccacgagcggactgacatcaagacgacctggctcgacagc
gtccgcgtcgcgaagagggcttggccagatctgccaagtcaccgactgaacgtcctttca
cgcttcctcggcattcggcacaagcatcacgatgcactgagcgacgcccgcgcccgccgg
catggtgatcgtacgggccattga
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