Sphingomonas naphthae: PQ455_14610
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Entry
PQ455_14610 CDS
T08850
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snap03000
]
PQ455_14610
Transcription factors [BR:
snap03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PQ455_14610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
Dimerisation
HTH_Crp_2
Fe_dep_repress
Rrf2
HTH_27
MarR
DUF742
HTH_24
HTH_47
LexA_DNA_bind
TrmB
HTH_20
RPA_C
Motif
Other DBs
NCBI-ProteinID:
WCT72857
LinkDB
All DBs
Position
3041771..3042589
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AA seq
272 aa
AA seq
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MRTDDDSSNTAAVKSADRVLDLLELLARADQPLSHADIAARLAIPKSSLTPLLRNLARRG
YLEIAPDGRNHRLGPALATLARAAGRRDLAEDAMPFLREATRETGESSAFNQLRGQEVEV
VATVIGSHRLVTHMRLGDRAPLYATSSGKLILAYMPDAFQRDYIADIRFQSWTPHTITSR
AALRDELAAVRESGFAYSREEWTPGIVGIGAVLLDEQDQPIGAVNHAVPVARYDEAADAR
ARHSLRRCVGDFRRHILSADMPPMMRDRHDPA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagaacggatgacgattcctcgaacacggccgccgtcaaatccgccgatcgcgtgctg
gacctgctcgaactgctcgcgcgtgccgaccagccgctgtcgcacgccgacatcgccgcc
cgcctcgctatccccaagagcagcctgacgccgctgctgcgcaacctcgcgcggcgcggc
tacctcgagatagcaccggacgggcgtaaccatcgcctcggcccggcgctcgccacgctc
gcgcgggcggccgggcggcgcgatctggcggaggatgccatgcccttcctgcgcgaagcg
acgcgcgagaccggcgagagcagcgccttcaaccagttgcgggggcaggaggtggaggtc
gtggcgaccgtcatcgggtcgcaccggctggtcacccacatgcggctgggcgaccgcgcc
ccgctctacgccacctccagcggcaagctgatcctcgcttacatgcccgatgcgttccag
cgcgattatatcgccgacattcgcttccagagctggaccccgcacacaatcaccagccgc
gccgcgctgcgtgacgaactggcggcggtgcgcgaatcgggtttcgcttactcgcgcgag
gaatggacgccgggcatcgtcggcatcggcgcggtgctcctcgacgagcaggatcagccg
atcggcgcggtcaaccacgcggtgccggtcgcccgctatgacgaggcggccgacgcccgc
gcgcgccactcgctgcggcgctgtgtgggcgatttccggcggcacatcctgtcagcggac
atgccgcccatgatgcgggatcgccacgatccagcttga
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