Sphingomonas naphthae: PQ455_15525
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Entry
PQ455_15525 CDS
T08850
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
snap
Sphingomonas naphthae
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snap03032
]
PQ455_15525 (gyrA)
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_15525 (gyrA)
Enzymes [BR:
snap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PQ455_15525 (gyrA)
DNA replication proteins [BR:
snap03032
]
Prokaryotic type
DNA Topoisomerases
PQ455_15525 (gyrA)
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PQ455_15525 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WCT73025
LinkDB
All DBs
Position
3206321..3209104
Genome browser
AA seq
927 aa
AA seq
DB search
MASVPPTIENSDISPINIVDEMKSSYLDYAMSVIVARALPDVRDGLKPVHRRILYASQEG
GFVPGRPYRKSAKIVGDVMGNYHPHGDSSIYMALARMAQDWAMRVMLVDGQGNFGSMDPD
MPASMRYTEARLSKAAMALLEDIDKDTVNFQPNYDGSRDEPSVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVIAACKAYIAKEVLGGELISLEELMEIVPGPDFPTGGLILGRGGAR
NAYTVGRGSIIMRSRHVIEEGRGEKRAIVLTEIPYQVGKAGLVEGIAEAAKDKRIEGISD
IRDESNRFGVRIVMELKRDATPEVVLNQLWRHTSAQTSFPANMLALRSGRPEVLSLKEII
QAFVSFREEVITRRSKYELLKARERAHLLLGLVIAVTNLDEVVRIIRGSSSPAEARAALL
AREWPVAEIAPYIKLVESVEHVGGDGTAYRLSEAQVRAILDLRLHRLTALGRDEIGNELE
GLATVIGELLFILGNRGRLYEVMGEELDAILAAFATPRKTEIAPAGDDIDDEDLIEREDM
VVTVTLGGYIKRTPLDAFRAQRRGGKGRSGMGTKDEDAVTALFVTSTHTPVLFFSTHGKV
YRKKVYRLPEGAPQARGRPMINLLPLAPGETISTVLPLPEDEAEWGNLHILFATAKGLVR
RNSMDAFTNIRTAGKLAMRFGTDDESEDTSDRLIGVTLLTEEDDVLLATRNGKAIRFRST
DVREFQSRTASGVRGAKLLGDDEVISLSILKSTPWDQDTETREAYLRAAPWKEGERATDL
DPALVAEMAEREEFIMTVCANGYGKRSSAYEYRRIGRGGQGITNIDNLGRNGPVVASFPA
HKGEQLMLVTDQAKLIRMSVGDTRVIGRGSAGVRLFHVADGEHVVGAARIEESEDEAETH
LGDGALATSDGENDATIGDDAADGGEG
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
ttggccagcgtcccgccgaccatcgagaacagcgacatctcgcccatcaacatcgtcgac
gagatgaagtcgagctatctcgactatgccatgtcggtcatcgtcgcgcgcgcgctgccc
gacgtgcgcgatggcctgaagccggtccaccgccgcatcctctacgccagccaggaaggc
ggcttcgtccccggccggccgtatcgcaaatccgccaagatcgtcggcgacgtgatgggt
aattaccatccgcacggcgacagctcgatctacatggcgctggcccgcatggcgcaggat
tgggcgatgcgcgtcatgctggtcgacggccagggcaatttcgggtcgatggacccggat
atgcccgcgtcgatgcgctataccgaggcgcgtctctccaaggcggcgatggcgctcttg
gaggatatcgacaaggacacggtcaacttccagccgaattacgacgggtcgcgcgacgag
ccttccgtgctgccggcgcgcttccccaatctgctggtcaacggcgcgggcggcatcgcc
gtcggcatggcgaccaacattccgccgcacaatctgggcgaagtgatcgccgcctgtaag
gcgtatatcgccaaggaagtgctgggcggcgaactcatcagcctggaagagctgatggag
atcgtgcccggccccgatttcccgaccggcggcctcatcctcggccggggcggcgcgcgc
aacgcctataccgtcgggcgcggatcgatcatcatgcgctcgcgccatgtgatcgaggaa
gggcgcggcgagaagcgcgccatcgtcctcaccgaaatcccctatcaggtcggcaaggcc
gggctggtcgaaggcatcgccgaggccgcgaaagacaagcggatcgagggcatttccgac
atccgcgacgagagcaaccgcttcggcgtgcgcatcgtgatggagctgaagcgcgacgcc
acgcccgaggtggtgctgaaccagctgtggcgccacacgtcggcgcagacgagcttcccg
gccaatatgctggcgctgcgcagcggccggccggaagtgctgagcctcaaggagatcatc
caggcgttcgtctccttccgtgaggaagtcatcacccgccgctcgaaatatgagctgctg
aaggcgcgcgagcgggcgcatctgttgctcggcctcgtcatcgccgtcaccaatctggac
gaggtggtgcggatcatccggggctcgtcctcgcccgccgaggcccgcgccgcgctgctg
gcgcgcgaatggccggtcgccgagatcgcgccctacatcaagctggtcgaatcggtcgag
catgtcggcggcgacggcaccgcctatcgcctgtccgaagcgcaggtccgcgcgatcctc
gatctacgcctgcaccgactgacggcgctcggccgcgacgagatcggcaacgagctggag
gggctggcgaccgtcatcggcgagctgctcttcatcctgggcaatcgcggccgcctctat
gaagtgatgggcgaggagctggacgcgatcctcgcggccttcgccaccccccgcaagacc
gagatcgcgcccgccggcgacgatatcgacgatgaggatctgatcgagcgcgaggacatg
gtcgtcaccgtcacgctcggcggctacatcaagcgcaccccgctcgatgccttccgcgcc
cagcggcgcggcggcaagggccgttcgggcatgggcaccaaggacgaggatgccgtcacc
gctctgttcgtcacctcgacgcacacgccggtgctgttcttctccacccacggcaaggtc
tatcgcaagaaggtctatcgcctgcccgaaggcgccccgcaggcgcgcggccggccgatg
ataaacctcctcccgctggcgcccggcgagacgatctcgaccgtgctgccgctgcccgag
gacgaggcggagtggggcaatctccacatcctgttcgcgaccgccaaggggctggtccgc
cggaactccatggatgccttcaccaacatccgcaccgccggcaagctggcgatgcgcttc
ggcaccgacgacgagagcgaggacacgagcgaccggctgatcggcgtgaccctgctgacc
gaagaggatgacgtgctgctcgccacccgcaacggcaaggcgatccgcttccgctcgacc
gacgtgcgcgagttccagagccgcaccgcatccggcgtgcgcggcgccaagctgctcggc
gacgacgaggtgatctcactgtcgatcctgaagagcacgccatgggatcaggacaccgag
acgcgcgaagcctatctgcgcgccgcgccgtggaaggaaggcgagcgtgccaccgatctc
gaccccgccctcgtcgccgaaatggccgagcgggaggagttcatcatgacggtctgcgcc
aacggctatggcaagcgcagctcggcctatgaatatcgccgcatcggccgtggcggtcag
ggcatcaccaatatcgacaatctcggccgcaacggcccggtcgtcgccagcttcccggcg
cacaagggcgagcagctgatgctcgtcaccgatcaggccaagctgatccgcatgtcggtg
ggcgacacgcgcgtgatcgggcgcgggtcggccggcgtgcggctgttccatgtggcggac
ggcgagcatgtcgtgggcgccgcacggatcgaggaaagcgaggacgaggccgagacccat
ctgggcgacggtgcgttggcgaccagcgacggcgagaatgacgcgaccatcggcgacgat
gccgccgacggcggagaaggctga
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