Sphingomonas naphthae: PQ455_16320
Help
Entry
PQ455_16320 CDS
T08850
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
snap
Sphingomonas naphthae
Pathway
snap03030
DNA replication
snap03430
Mismatch repair
snap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQ455_16320 (holA)
03430 Mismatch repair
PQ455_16320 (holA)
03440 Homologous recombination
PQ455_16320 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snap03032
]
PQ455_16320 (holA)
03400 DNA repair and recombination proteins [BR:
snap03400
]
PQ455_16320 (holA)
Enzymes [BR:
snap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQ455_16320 (holA)
DNA replication proteins [BR:
snap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQ455_16320 (holA)
DNA repair and recombination proteins [BR:
snap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQ455_16320 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WCT73165
LinkDB
All DBs
Position
complement(3390514..3391539)
Genome browser
AA seq
341 aa
AA seq
DB search
MKATRPQIERALDRADADVRLFLLYGPDESGSAALAGRLAKAVGGGAERIDLTGGELRAD
PAALADQAAAISLFGDPRWIRVENAGDESLPAVEALLEASAAGNPVAMVAGNLRKDSKLL
KLALASPAVLVFASYAPEGADADRLAQQMARDAGLMIRPDVAQRLAKATNGDRALLAQEI
EKLALYADAAPDRPGEIDHEALDDLGAALDEGDLSRLVGAVLSGRPADADREMARLGTEG
IAGIPVARALLRRLMLLGGLRAQMANGETLSGVMATSGKAIFWKEKDEVQAQLSRWTPEA
IARAIDRLGAAERQIKASGTVGTVLLDEELIAIARHAQRLR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgacccgcccgcagatcgagcgcgcgctcgatcgggcggatgcggacgtccgc
ctgttcctgctctacggccccgacgaatcgggatcggcggcgctagccgggcggctggcc
aaggccgtcggcggcggcgcggagcggatcgacctgacgggcggcgaattgcgcgccgac
cccgccgcgctggccgatcaggcggcggccatctcgctgttcggcgatccgcgctggatc
cgcgtcgagaatgccggtgacgagagcctgcccgccgtcgaggcgctgctggaggcgtcg
gccgccggcaatccggtggcgatggtcgcgggcaatctgcgcaaggattccaagctgctc
aagctggcgctggccagcccggcggtgctggtgttcgccagctacgcgcccgagggggcc
gatgccgatcggctggcgcagcagatggcgcgcgacgccgggctgatgatccgccccgac
gtcgcccagcggctcgccaaggccaccaacggagaccgcgccttgctggcgcaggagatc
gagaagctcgcgctctacgccgatgccgcgcccgatcggccgggcgagatcgatcatgag
gcgctcgacgatctcggcgccgcgctcgacgagggcgatctcagccggctggtcggcgcg
gtcctgtccggccggcccgccgacgccgatcgcgaaatggcccggctcggcaccgagggc
atcgccggcatccccgtcgcccgcgccttgctccgccggctgatgctgctcggcggcctg
cgcgcgcagatggcgaatggcgagacgctgtcgggcgtgatggcgacatcgggcaaggcg
atcttctggaaggagaaggacgaggtgcaggcgcagctgtcgcgctggaccccggaggcg
atcgcccgcgccatcgaccggctgggcgcggccgaacgccagatcaaggcgagcggcacg
gtgggcacggtgctgctcgacgaggaactgatcgccatcgcacggcacgcgcaaaggttg
cgataa
DBGET
integrated database retrieval system
